RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	IGF1	P05019	195 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	RORC	P51449	518 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	NDP	Q00604	133 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	CFHR3	Q02985	330 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	PSG5	Q15238	335 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	CLCC1	Q96S66	551 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	OR51J1	Q9H342	316 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	PARP11	Q9NR21	331 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	SLC35D1	Q9NTN3	355 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	LINC00473	A8K010	186 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	ATP6V0E1	O15342	81 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	HPGDS	O60760	199 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	TUSC2	O75896	110 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	IGLV2-14	P01704	120 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	RPLP1	P05386	114 aa	Known RBP	13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	LUM	P51884	338 aa	Predicted RBP	13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	TMBIM6	P55061	237 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	ARPC4	P59998	168 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	RPL23A	P62750	156 aa	Known RBP	13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	CX3CL1	P78423	397 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	PLGLA	Q15195	96 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	TEX38	Q6PEX7	206 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	PDPN	Q86YL7	162 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	BVES	Q8NE79	360 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	RAB2B	Q8WUD1	216 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	FLYWCH2	Q96CP2	140 aa	Known RBP	13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	RNF5	Q99942	180 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	TPSG1	Q9NRR2	321 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	METTL1	Q9UBP6	276 aa	Known RBP	13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	FBXO7	Q9Y3I1	522 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	DNAH3	Q8TD57	4116 aa		13.66	□□□□□ -0.22
CTSB-223	ENST00000532370	NOTCH3	Q9UM47	2321 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	PF4V1	P10720	104 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	ELK1	P19419	428 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	VDAC1	P21796	283 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	DUT	P33316	252 aa	Known RBP	13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	ZNF645	Q8N7E2	425 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	DDB2	Q92466	427 aa		13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	MRPS7	Q9Y2R9	242 aa	Known RBP	13.65	□□□□□ -0.22
CTSB-223	ENST00000532370	PRKDC	P78527	4128 aa	Known RBP	13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	SRRM4	A7MD48	611 aa	Known RBP	13.64	□□□□□ -0.23
CTSB-223	ENST00000532370		G3V4G9	280 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	SLC25A17	O43808	307 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	IGLV2-23	P01705	113 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	APOA1	P02647	267 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	EGR2	P11161	476 aa	Predicted RBP	13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	AADAC	P22760	399 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	FCGR2C	P31995	323 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	CBX5	P45973	191 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	THBS3	P49746	956 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	DEFA6	Q01524	100 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	SPCS2	Q15005	226 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	COMMD1	Q8N668	190 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	ACOT12	Q8WYK0	555 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	TSNAX	Q99598	290 aa	Known RBP	13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	GON7	Q9BXV9	100 aa		13.64	□□□□□ -0.23
CTSB-223	ENST00000532370	IGHG4	P01861	327 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	OR5H8	P0DN80	308 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	PPIF	P30405	207 aa	Known RBP	13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	RPL30	P62888	115 aa	Known RBP	13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	PJVK	Q0ZLH3	352 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	FOXE3	Q13461	319 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	C8orf86	Q6ZUL3	223 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	GPHA2	Q96T91	129 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	FAM103A1	Q9BTL3	118 aa	Known RBP	13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	RBM38	Q9H0Z9	239 aa	Known RBP	13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	KLK15	Q9H2R5	256 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	IFT46	Q9NQC8	304 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	ZFP57	Q9NU63	452 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	NECAP2	Q9NVZ3	263 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF580	Q9UK33	172 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	RBMX2	Q9Y388	322 aa	Known RBP	13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	CEPT1	Q9Y6K0	416 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	A3GALT2	U3KPV4	340 aa		13.63	□□□□□ -0.23
CTSB-223	ENST00000532370	TRAV41	A0A0B4J266	112 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	NUDT19	A8MXV4	375 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	CA2	P00918	260 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ELANE	P08246	267 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF182	P17025	639 aa	Predicted RBP	13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	PSMB8	P28062	276 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	PRSS3	P35030	304 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	RTL8B	Q17RB0	113 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ECSCR	Q19T08	205 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	TMEM177	Q53S58	311 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	OR2B11	Q5JQS5	317 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ETV3L	Q6ZN32	361 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	SNX29P2	Q8IUI4	249 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	RNF152	Q8N8N0	203 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	KLHL30-AS1	Q8NEE0	82 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	OR5AP2	Q8NGF4	316 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ADTRP	Q96IZ2	230 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	HARBI1	Q96MB7	349 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	CMTM3	Q96MX0	182 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	DUX3	Q96PT4	197 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	ANAPC10	Q9UM13	185 aa		13.62	□□□□□ -0.23
CTSB-223	ENST00000532370	SMIM31	A0A1B0GVY4	71 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	ARPC1B	O15143	372 aa	Known RBP	13.61	□□□□□ -0.23

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