RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ATP6AP1LQ52LC2 224 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC35E4Q6ICL7 350 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CLEC19AQ6UXS0 136 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF675Q8TD23 568 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CANT1Q8WVQ1 401 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 LCN9Q8WX39 176 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SMIM8Q96KF7 97 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 PBDC1Q9BVG4 233 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC25A31Q9H0C2 315 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 RFNGQ9Y644 331 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SLIT2O94813 1529 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 BORCS7-ASMTA0A0B4J1R7 106 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 TRGV8A0A0C4DH27 118 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 LINC01548A6NM66 108 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 H3BP45 60 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 PIAS1O75925 651 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 NTN1O95631 604 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 PRSS2P07478 247 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ZBTB25P24278 435 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 MDH2P40926 338 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 EMP1P54849 157 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 JOSD1Q15040 202 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 MESTQ5EB52 335 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC25A30Q5SVS4 291 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 DEFB125Q8N687 156 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 FLVCR1-AS1Q8TAF5 88 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 CCL17Q92583 94 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF689Q96CS4 500 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 HEXA-AS1Q9H8Q6 139 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 MOB1AQ9H8S9 216 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 NUFIP1Q9UHK0 495 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF831Q5JPB2 1677 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 PLAC8L1A1L4L8 177 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 TMEM189A5PLL7 270 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 H7C1C5 153 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 UBFD1O14562 309 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 MYL12BO14950 172 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 GNG7O60262 68 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 SNAPC5O75971 98 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 TOMM40O96008 361 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF14P17017 642 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 HOXA5P20719 270 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 BRS3P32247 399 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 APLNRP35414 380 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 LCN6P62502 163 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 RPS21P63220 83 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 LTC4SQ16873 150 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 C10orf25Q5T742 122 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 NXNL2Q5VZ03 156 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF613Q6PF04 617 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 C17orf82Q86X59 251 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 KLHDC8BQ8IXV7 354 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 TMEM178AQ8NBL3 297 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 OR13A1Q8NGR1 328 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 JOSD2Q8TAC2 188 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 ROPN1LQ96C74 230 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 GALNT14Q96FL9 552 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC35G5Q96KT7 338 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 SRMSQ9H3Y6 488 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 HEBP1Q9NRV9 189 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 RBFOX1Q9NWB1 397 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 PLIN4Q96Q06 1357 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 NRAPQ86VF7 1730 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 DYSFO75923 2080 aa4.1□□□□□ -1.75
ECHDC1-222ENST00000531967 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 TMEM218A2RU14 115 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 IGLL1P15814 213 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHV1-2P23083 117 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 WDR38Q5JTN6 314 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 TMEM236Q5W0B7 351 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 C20orf196Q8IYI0 205 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 SYT8Q8NBV8 401 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 GPR119Q8TDV5 335 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF431Q8TF32 576 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM151AQ8WW52 585 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 HIST1H2BAQ96A08 127 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 PTX4Q96A99 478 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 MRPS24Q96EL2 167 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 PRSS27Q9BQR3 290 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 THTPAQ9BU02 230 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 HES4Q9HCC6 221 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 MMP26Q9NRE1 261 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF629Q9UEG4 869 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 SIGLEC7Q9Y286 467 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 RNF11Q9Y3C5 154 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 ROBO1Q9Y6N7 1651 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 COL5A3P25940 1745 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 CROCCQ5TZA2 2017 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 MEIKINA0A087WXM9 373 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 A0A0G2JND7 137 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM220BPB1ANY3 271 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 CA2P00918 260 aa4.09□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHMP01871 453 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms