RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
NEDD8-206ENST00000531430 RHOGP84095 191 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 CBX3Q13185 183 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 TNXAQ16473 311 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 DEFB114Q30KQ6 69 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 YIF1BQ5BJH7 314 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 SLC16A13Q7RTY0 426 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 PDPNQ86YL7 162 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 OR52B4Q8NGK2 314 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 ACOT12Q8WYK0 555 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 TMEM68Q96MH6 324 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 AKIP1Q9NQ31 210 aa6.96□□□□□ -1.3
NEDD8-206ENST00000531430 MRPS18AQ9NVS2 196 aaKnown RBP6.96□□□□□ -1.3
NEDD8-206ENST00000531430 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.3
NEDD8-206ENST00000531430 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 PPP5D1E7EU14 171 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 PROP1O75360 226 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 TUSC2O75896 110 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 OR2C1O95371 312 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 DCKP27707 260 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 KIR2DS2P43631 304 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 RPS11P62280 158 aaKnown RBP eCLIP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 MED21Q13503 144 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 EXOSC2Q13868 293 aaKnown RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 CEMP1Q6PRD7 247 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 LAX1Q8IWV1 398 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 CDH26Q8IXH8 852 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 SVOPQ8N4V2 548 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 APH1BQ8WW43 257 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 OVOL2Q9BRP0 275 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 NICN1Q9BSH3 213 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 HDHD3Q9BSH5 251 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 GGTLC1Q9BX51 225 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 GHRLQ9UBU3 117 aa6.95□□□□□ -1.3
NEDD8-206ENST00000531430 EXOSC1Q9Y3B2 195 aaKnown RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 RBM7Q9Y580 266 aaKnown RBP6.95□□□□□ -1.3
NEDD8-206ENST00000531430 HERC2O95714 4834 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 TRBV5-7A0A0A0MS05 114 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 C2orf70A6NJV1 201 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 BMPR1BO00238 502 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 RBMXL2O75526 392 aaKnown RBP6.94□□□□□ -1.3
NEDD8-206ENST00000531430 OR2J3O76001 311 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 ACTL6BO94805 426 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 IGHV3-23P01764 117 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 OR9G9P0C7N8 305 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 CELP19835 753 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 RPS27AP62979 156 aaKnown RBP6.94□□□□□ -1.3
NEDD8-206ENST00000531430 EWSR1Q01844 656 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEDD8-206ENST00000531430 TAGLNQ01995 201 aaKnown RBP6.94□□□□□ -1.3
NEDD8-206ENST00000531430 IDO2Q6ZQW0 420 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 ZNF555Q8NEP9 628 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 CACNG8Q8WXS5 425 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 GGHQ92820 318 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 TMEM80Q96HE8 168 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 SLC29A1Q99808 456 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 TMEM59Q9BXS4 323 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 KCNK15Q9H427 330 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 RDH8Q9NYR8 311 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 AK3Q9UIJ7 227 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 S4R3C0 116 aa6.94□□□□□ -1.3
NEDD8-206ENST00000531430 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 IRGMA1A4Y4 181 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 SRRM4A7MD48 611 aaKnown RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 J3QRK9 145 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 ITGB1BP1O14713 200 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 SOCS1O15524 211 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 SPRY2O43597 315 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 NAPSAO96009 420 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 IGLV2-23P01705 113 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 CRYGBP07316 175 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 CD3GP09693 182 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 UBBP0CG47 229 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 HLA-DRB3P79483 266 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 SSBP2P81877 361 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 GLT8D1Q68CQ7 371 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 ZNF57Q68EA5 555 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 ZNF880Q6PDB4 577 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 MOB1BQ7L9L4 216 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 LYG2Q86SG7 212 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 ADAD2Q8NCV1 583 aaKnown RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 KCNG3Q8TAE7 436 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 DERL3Q96Q80 235 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 UQCC2Q9BRT2 126 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 C9orf16Q9BUW7 83 aa6.93□□□□□ -1.3
NEDD8-206ENST00000531430 RIMS4Q9H426 269 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 TECRQ9NZ01 308 aaKnown RBP6.93□□□□□ -1.3
NEDD8-206ENST00000531430 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
NEDD8-206ENST00000531430 BET1O15155 118 aa6.92□□□□□ -1.3
NEDD8-206ENST00000531430 GGCTO75223 188 aaKnown RBP6.92□□□□□ -1.3
NEDD8-206ENST00000531430 WBP4O75554 376 aaKnown RBP6.92□□□□□ -1.3
NEDD8-206ENST00000531430 ATP5HO75947 161 aa6.92□□□□□ -1.3
NEDD8-206ENST00000531430 NDUFB8O95169 186 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms