RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CASTOR1Q8WTX7 329 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 ALX4Q9H161 411 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 TMEM272A0A1B0GTI8 110 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 METTL21EPA6NDL7 271 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 LINC01619G3V211 115 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 EGR2P11161 476 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 CD36P16671 472 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 GADD45AP24522 165 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 AKIRIN2Q53H80 203 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 UNQ5815/PRO19632Q6UWF5 114 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 TOLLIPQ9H0E2 274 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 RDH8Q9NYR8 311 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 U3KQK5 164 aa17.26■□□□□ 0.35
TRAPPC4-210ENST00000531290 LOC100506127A0A0U1RQW1 187 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 SHISA3A0PJX4 238 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 APOA2P02652 100 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 TFAP2AP05549 437 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 SERPINB10P48595 397 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 PLAC9Q5JTB6 97 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 FAM103A1Q9BTL3 118 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 OR51E2Q9H255 320 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 GAB2Q9UQC2 676 aa17.25■□□□□ 0.35
TRAPPC4-210ENST00000531290 IGKV1-6A0A0C4DH72 117 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 NOTOA8MTQ0 251 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 PROP1O75360 226 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 SAP30O75446 220 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 SPDEFO95238 335 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 LGALS1P09382 135 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 CD3GP09693 182 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 RAB6AP20340 208 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 TIMM50Q3ZCQ8 353 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 PDPNQ86YL7 162 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 ZNF383Q8NA42 475 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 LFNGQ8NES3 379 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 OR4A4PQ8NGN8 299 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 DLX4Q92988 240 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 FLYWCH2Q96CP2 140 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 RAB3CQ96E17 227 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 MS4A10Q96PG2 267 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 ASCL2Q99929 193 aa17.24■□□□□ 0.35
TRAPPC4-210ENST00000531290 KMT2CQ8NEZ4 4911 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 M0R1X1 148 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 LDLRAD4O15165 306 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 CA2P00918 260 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 IGKV1-16P04430 117 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 SLURP1P55000 103 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 LINC00205P59089 165 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 SMAD5-AS1Q9Y6J3 95 aa17.23■□□□□ 0.35
TRAPPC4-210ENST00000531290 SMIM30A4D0T7 59 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 FABP7O15540 132 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 IGHV3-11P01762 117 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 HSPB1P04792 205 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 TPPP2P59282 170 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 ARPC1AQ92747 370 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 ATG5Q9H1Y0 275 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 SLA2Q9H6Q3 261 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 SLC35D1Q9NTN3 355 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 DAPK2Q9UIK4 370 aa17.22■□□□□ 0.35
TRAPPC4-210ENST00000531290 IGHV4OR15-8A0A075B7B6 117 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 A0A087WW49 117 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 BET1O15155 118 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 SLC25A17O43808 307 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 CNIH1O95406 144 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 OR8U9P0C7N5 309 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 FXYD3Q14802 87 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 ARL6IP1Q15041 203 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 OR10R2Q8NGX6 335 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 OR10J5Q8NHC4 309 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 GRPEL2Q8TAA5 225 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 TPSG1Q9NRR2 321 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 ZNF355PQ9NSJ1 428 aa17.21■□□□□ 0.35
TRAPPC4-210ENST00000531290 TENM3Q9P273 2699 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 TRGV3P03979 118 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 SDC2P34741 201 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 LGALS7P47929 136 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 MXD1Q05195 221 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 PLA2G7Q13093 441 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 RHOVQ96L33 236 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 KCNK7Q9Y2U2 307 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 NBEAL2Q6ZNJ1 2754 aa17.2■□□□□ 0.34
TRAPPC4-210ENST00000531290 A0A075B6Q4 140 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 ARPC1BO15143 372 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 FCGR3AP08637 254 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 GSTT2P0CG29 244 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 GSTT2BP0CG30 244 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 SNRPBP14678 240 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 TALDO1P37837 337 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 CBX3Q13185 183 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 MOGAT2Q3SYC2 334 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 IGSF11Q5DX21 431 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 ACSM6Q6P461 480 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 SFXN4Q6P4A7 337 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 NR2C2APQ86WQ0 139 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 OR6Q1Q8NGQ2 317 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 OR4C12Q96R67 309 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 OR2D2Q9H210 308 aa17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 RBM7Q9Y580 266 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-210ENST00000531290 A0A0B4J203 849 aa17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 SCGNO76038 276 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms