RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 APOA2P02652 100 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 SPNP16150 400 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 CD40LGP29965 261 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 MAP2K4P45985 399 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 SERPINB10P48595 397 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 TPPP2P59282 170 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
CPSF1-205ENST00000531042 OR4A4PQ8NGN8 299 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 ARPC1AQ92747 370 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 FLYWCH2Q96CP2 140 aaKnown RBP12.16□□□□□ -0.46
CPSF1-205ENST00000531042 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 RAB22AQ9UL26 194 aa12.16□□□□□ -0.46
CPSF1-205ENST00000531042 M0R1X1 148 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 ARPC1BO15143 372 aaKnown RBP12.15□□□□□ -0.46
CPSF1-205ENST00000531042 FABP7O15540 132 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 SLC25A17O43808 307 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 CD3GP09693 182 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 OR8U9P0C7N5 309 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 GP9P14770 177 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 FXYD3Q14802 87 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 HES5Q5TA89 166 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
CPSF1-205ENST00000531042 BET1O15155 118 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 TRGV3P03979 118 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 FCGR3AP08637 254 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-205ENST00000531042 MRPS15P82914 257 aaKnown RBP12.14□□□□□ -0.47
CPSF1-205ENST00000531042 PITPNAQ00169 270 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 GRPEL2Q8TAA5 225 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 RAB3CQ96E17 227 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 CABLES2Q9BTV7 478 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 OR2D2Q9H210 308 aa12.14□□□□□ -0.47
CPSF1-205ENST00000531042 HUWE1Q7Z6Z7 4374 aaKnown RBP12.14□□□□□ -0.47
CPSF1-205ENST00000531042 TRBV6-7A0A0A0MS04 114 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 CRYGBP07316 175 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 GSTT2P0CG29 244 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 GSTT2BP0CG30 244 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 LGALS7P47929 136 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 TBCEQ15813 527 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-205ENST00000531042 SSX1Q16384 188 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 POC5Q8NA72 575 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 SDHAF2Q9NX18 166 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
CPSF1-205ENST00000531042 TRAV1-2A0A0B4J238 106 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 SHISA3A0PJX4 238 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 H3BUA1 57 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 RAB27BO00194 218 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 MFNGO00587 321 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 PDCD5O14737 125 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 CNIH1O95406 144 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 DIRAS3O95661 229 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 FRMD6-AS1P0C7T7 363 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 OR10A3P58181 314 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 OVCH2Q7RTZ1 564 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 C5orf30Q96GV9 206 aa12.12□□□□□ -0.47
CPSF1-205ENST00000531042 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 C13orf42A0A1B0GVH6 325 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 TRIM64CA6NLI5 447 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
CPSF1-205ENST00000531042 GNB3P16520 340 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 RAB6AP20340 208 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 GADD45AP24522 165 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 TAGLNQ01995 201 aaKnown RBP12.11□□□□□ -0.47
CPSF1-205ENST00000531042 TMEM177Q53S58 311 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 ZNF367Q7RTV3 350 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
CPSF1-205ENST00000531042 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-205ENST00000531042 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-205ENST00000531042 A0A075B6Q4 140 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
CPSF1-205ENST00000531042 BRI3O95415 125 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 CBX3Q13185 183 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 BVESQ8NE79 360 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 RCHY1Q96PM5 261 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 NDUFB11Q9NX14 153 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
CPSF1-205ENST00000531042 A0A0B4J203 849 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 ANKRD34BA5PLL1 514 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms