RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 J3QRK9 145 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 FGF16O43320 207 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 IFNA6P05013 189 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 THBS3P49746 956 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 HERV-K104P61576 105 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 TSPAN5P62079 268 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 RNASE10Q5GAN6 216 aaKnown RBP12.2□□□□□ -0.46
CCS-206ENST00000530961 TMEM17Q86X19 198 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 Q8N2B8 174 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 ZNF383Q8NA42 475 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 DRAXINQ8NBI3 349 aaPredicted RBP12.2□□□□□ -0.46
CCS-206ENST00000530961 ZNF2Q9BSG1 426 aaPredicted RBP12.2□□□□□ -0.46
CCS-206ENST00000530961 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 V9GYH0 126 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
CCS-206ENST00000530961 CLPSL1A2RUU4 121 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
CCS-206ENST00000530961 H7C2Y5 167 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 IGLV2-14P01704 120 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 APOA2P02652 100 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 CD74P04233 296 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 CSF1P09603 554 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 RRASP10301 218 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 BLCAPP62952 87 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 FBLN7Q53RD9 439 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 PYDC2Q56P42 97 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 AWAT1Q58HT5 328 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 C11orf88Q6PI97 169 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 GLDNQ6ZMI3 551 aaPredicted RBP12.19□□□□□ -0.46
CCS-206ENST00000530961 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 ARRDC1Q8N5I2 433 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 LINC01006Q8NI28 216 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 SECTM1Q8WVN6 248 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 MOB3AQ96BX8 217 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CCS-206ENST00000530961 SLC5A7Q9GZV3 580 aa12.19□□□□□ -0.46
CCS-206ENST00000530961 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 CD3DP04234 171 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 AMY1AP04745 511 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 AMY2AP04746 511 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
CCS-206ENST00000530961 FXYD4P59646 89 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 ZNF66Q6ZN08 573 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 LINC00299Q6ZSB3 139 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 OR2T6Q8NHC8 308 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCS-206ENST00000530961 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
CCS-206ENST00000530961 C5orf30Q96GV9 206 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
CCS-206ENST00000530961 CCL28Q9NRJ3 127 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
CCS-206ENST00000530961 M0QYG6 137 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 RAB3DO95716 219 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
CCS-206ENST00000530961 LINC00205P59089 165 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 CBX3Q13185 183 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 MEF2DQ14814 521 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 MMDQ15546 238 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 RTL8BQ17RB0 113 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 ABCA11PQ4W5N1 156 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 LPCAT3Q6P1A2 487 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 Q8N402 240 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 NPBQ8NG41 125 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 PRELID3BQ9Y3B1 194 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
CCS-206ENST00000530961 ANKRD20A5PA0PJZ0 165 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 GNRHRP30968 328 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 F2RL1P55085 397 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 UCP3P55916 312 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 DEFA6Q01524 100 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 ZNF79Q15937 498 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 CMTM1Q8IZ96 169 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 Q8N9W7 124 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 BVESQ8NE79 360 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 DDB2Q92466 427 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 RITA1Q96K30 269 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
CCS-206ENST00000530961 RASL11BQ9BPW5 248 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
CCS-206ENST00000530961 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
CCS-206ENST00000530961 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
CCS-206ENST00000530961 NBR2O15453 112 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 AKAIN1P0CW23 69 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 LGALS7P47929 136 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 AP3S2P59780 193 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
CCS-206ENST00000530961 ZNF45Q02386 682 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 EIF4EBP1Q13541 118 aaPredicted RBP12.15□□□□□ -0.46
CCS-206ENST00000530961 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 KCTD9Q7L273 389 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 MFSD4AQ8N468 514 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
CCS-206ENST00000530961 DEDD2Q8WXF8 326 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms