RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 OR5AU1Q8NGC0 362 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 SGMS2Q8NHU3 365 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 ABHD1Q96SE0 405 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 DCUN1D5Q9BTE7 237 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 FBXL15Q9H469 300 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 SCPEP1Q9HB40 452 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 RSL24D1Q9UHA3 163 aaKnown RBP10.56□□□□□ -0.72
VPS28-210ENST00000529182 ZNF107Q9UII5 783 aaPredicted RBP10.56□□□□□ -0.72
VPS28-210ENST00000529182 ADAM30Q9UKF2 790 aa10.56□□□□□ -0.72
VPS28-210ENST00000529182 FBXO24O75426 580 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 NDUFA3O95167 84 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 PPYP01298 95 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 THBS3P49746 956 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 FXYD4P59646 89 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 RPS16P62249 146 aaKnown RBP10.55□□□□□ -0.72
VPS28-210ENST00000529182 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 ZNF329Q86UD4 541 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 BVESQ8NE79 360 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 OR5H2Q8NGV7 314 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 OR52I2Q8NH67 350 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 SECTM1Q8WVN6 248 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 CITED2Q99967 270 aaPredicted RBP10.55□□□□□ -0.72
VPS28-210ENST00000529182 KIAA1456Q9P272 454 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 RBMX2Q9Y388 322 aaKnown RBP10.55□□□□□ -0.72
VPS28-210ENST00000529182 WNK1Q9H4A3 2382 aa10.55□□□□□ -0.72
VPS28-210ENST00000529182 SULT1C2O00338 296 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 RRHO14718 337 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 RBBP9O75884 186 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 HRH1P35367 487 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 TAS2R46P59540 309 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 RPL30P62888 115 aaKnown RBP10.54□□□□□ -0.72
VPS28-210ENST00000529182 NSUN5P1Q3KNT7 163 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 TCTEX1D4Q5JR98 221 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 OVCH2Q7RTZ1 564 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 TMEM17Q86X19 198 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 FOXRED2Q8IWF2 684 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 STPG2Q8N412 459 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 GIMAP1Q8WWP7 306 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 DDB2Q92466 427 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
VPS28-210ENST00000529182 DIRAS2Q96HU8 199 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 CLCC1Q96S66 551 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 CCL28Q9NRJ3 127 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 TAS2R8Q9NYW2 309 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 KLK11Q9UBX7 282 aa10.54□□□□□ -0.72
VPS28-210ENST00000529182 IGHV7-81A0A0B4J1V7 117 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 AP4M1O00189 453 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 FCN1O00602 326 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 TNFSF12O43508 249 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 TSPAN15O95858 294 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 HLA-DRB1P01911 266 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 RCVRNP35243 200 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 DGCR2P98153 550 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 NDPQ00604 133 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 EIF4EBP1Q13541 118 aaPredicted RBP10.53□□□□□ -0.72
VPS28-210ENST00000529182 DYRK1AQ13627 763 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 PLGLAQ15195 96 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 PSG5Q15238 335 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 OR2B11Q5JQS5 317 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 ZNF660Q6AZW8 331 aaPredicted RBP10.53□□□□□ -0.72
VPS28-210ENST00000529182 LIN54Q6MZP7 749 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
VPS28-210ENST00000529182 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
VPS28-210ENST00000529182 NXF2Q9GZY0 626 aaKnown RBP10.53□□□□□ -0.72
VPS28-210ENST00000529182 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
VPS28-210ENST00000529182 TET2Q6N021 2002 aaPredicted RBP10.52□□□□□ -0.73
VPS28-210ENST00000529182 A0A1W2PRX2 142 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 SRRM4A7MD48 611 aaKnown RBP10.52□□□□□ -0.73
VPS28-210ENST00000529182 M0QYG6 137 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 M0QZ24 198 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 KCNAB3O43448 404 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 SLC25A17O43808 307 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 FCGR3BO75015 233 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 SLC22A5O76082 557 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 CRYZL1O95825 349 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 HERV-K104P61576 105 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 CD83Q01151 205 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 IL18Q14116 193 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 RTL8BQ17RB0 113 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 TMEM177Q53S58 311 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 DHRS11Q6UWP2 260 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 ZNF818PQ6ZRF7 136 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 MFSD4AQ8N468 514 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 CHPT1Q8WUD6 406 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 ADTRPQ96IZ2 230 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
VPS28-210ENST00000529182 RNF5Q99942 180 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 FXYD6Q9H0Q3 95 aa10.52□□□□□ -0.73
VPS28-210ENST00000529182 PARP11Q9NR21 331 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms