RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-205ENST00000527046 BVESQ8NE79 360 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 TERB2Q8NHR7 220 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 SECTM1Q8WVN6 248 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 CAPSLQ8WWF8 208 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 S1PR3Q99500 378 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 RSRP1Q9BUV0 290 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 SLC5A7Q9GZV3 580 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 TAS2R8Q9NYW2 309 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 C1RLQ9NZP8 487 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 PGLYRP1O75594 196 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-205ENST00000527046 IGLV2-23P01705 113 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 AKAIN1P0CW23 69 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 BTCP35070 178 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 RIPPLY3P57055 190 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 Q6ZSV7 163 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 ZBTB34Q8NCN2 500 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 OR51S1Q8NGJ8 323 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 ZFAND2BQ8WV99 257 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 AKR1E2Q96JD6 320 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 JMJD8Q96S16 334 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 MDFIQ99750 246 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 RTBDNQ9BSG5 229 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-205ENST00000527046 SLC2A8Q9NY64 477 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 GPR132Q9UNW8 380 aa8.57□□□□□ -1.04
NEDD8-205ENST00000527046 SH2D7A6NKC9 451 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-205ENST00000527046 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TRIM77I1YAP6 450 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TSPAN9O75954 239 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 SLC22A5O76082 557 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 OR2F2O95006 317 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 MOSP00540 346 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 CRYGBP07316 175 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 CD40LGP29965 261 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TSPAN5P62079 268 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 MEF2DQ14814 521 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 ZNF585BQ52M93 769 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 C11orf88Q6PI97 169 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TMEM17Q86X19 198 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 Q8N2B8 174 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 FAM71E2Q8N5Q1 922 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 Q8N9W7 124 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 NPBQ8NG41 125 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 ZNF702PQ9H963 129 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 ABCB10Q9NRK6 738 aa8.56□□□□□ -1.04
NEDD8-205ENST00000527046 RBM7Q9Y580 266 aaKnown RBP8.56□□□□□ -1.04
NEDD8-205ENST00000527046 TMEM89A2RUT3 159 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 PLXNB1O43157 2135 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 TNFSF12O43508 249 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 NDUFA3O95167 84 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 IFNA6P05013 189 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-205ENST00000527046 FAM106CPP0CH98 169 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 HKR1P10072 659 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 PI3P19957 117 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 MC5RP33032 325 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 THBS3P49746 956 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-205ENST00000527046 TMEM177Q53S58 311 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 ZNF66Q6ZN08 573 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 MARCH1Q8TCQ1 289 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 S100ZQ8WXG8 99 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 TMEM230Q96A57 120 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 SLC25A33Q9BSK2 321 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 VSIG4Q9Y279 399 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 WASHC3Q9Y3C0 194 aa8.55□□□□□ -1.04
NEDD8-205ENST00000527046 GPR31O00270 319 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 FCN1O00602 326 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 RAMP3O60896 148 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 NDUFA7O95182 113 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 TMEM11P17152 192 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 RPL15P61313 204 aaKnown RBP8.54□□□□□ -1.04
NEDD8-205ENST00000527046 HERV-K104P61576 105 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 ZNF846Q147U1 533 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 PSG5Q15238 335 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 KRTAP21-3Q3LHN1 58 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 PDPNQ86YL7 162 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 WIPF2Q8TF74 440 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-205ENST00000527046 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 HSD17B10Q99714 261 aaKnown RBP8.54□□□□□ -1.04
NEDD8-205ENST00000527046 RNF5Q99942 180 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 SLC35D1Q9NTN3 355 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 SERTAD4Q9NUC0 356 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
NEDD8-205ENST00000527046 DISC1C4P0D8 188 aa8.53□□□□□ -1.04
NEDD8-205ENST00000527046 FGF16O43320 207 aa8.53□□□□□ -1.04
NEDD8-205ENST00000527046 UPK1BO75841 260 aa8.53□□□□□ -1.04
NEDD8-205ENST00000527046 IGKV1-39P01597 117 aa8.53□□□□□ -1.04
NEDD8-205ENST00000527046 IGKV1D-39P04432 117 aa8.53□□□□□ -1.04
NEDD8-205ENST00000527046 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms