RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 C5orf30Q96GV9 206 aa15.01□□□□□ -0.01
PKP3-204ENST00000526971 RNF5Q99942 180 aa15.01□□□□□ -0.01
PKP3-204ENST00000526971 HSPB9Q9BQS6 159 aa15.01□□□□□ -0.01
PKP3-204ENST00000526971 OR2W1Q9Y3N9 320 aa15.01□□□□□ -0.01
PKP3-204ENST00000526971 TCRBV4S1A1TA0A5B7 111 aa15□□□□□ -0.01
PKP3-204ENST00000526971 APOA1P02647 267 aa15□□□□□ -0.01
PKP3-204ENST00000526971 CD33P20138 364 aa15□□□□□ -0.01
PKP3-204ENST00000526971 NFYAP23511 347 aaPredicted RBP15□□□□□ -0.01
PKP3-204ENST00000526971 C5orf64Q2M2E5 130 aa15□□□□□ -0.01
PKP3-204ENST00000526971 KIAA1456Q9P272 454 aa15□□□□□ -0.01
PKP3-204ENST00000526971 ZNF107Q9UII5 783 aaPredicted RBP15□□□□□ -0.01
PKP3-204ENST00000526971 HLA-DRB1P01911 266 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 HLA-DQB1P01920 261 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 APOA2P02652 100 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 ZNF182P17025 639 aaPredicted RBP14.99□□□□□ -0.01
PKP3-204ENST00000526971 RPL5P46777 297 aaKnown RBP14.99□□□□□ -0.01
PKP3-204ENST00000526971 LUMP51884 338 aaPredicted RBP14.99□□□□□ -0.01
PKP3-204ENST00000526971 ARPC4P59998 168 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 SLC35B1P78383 322 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 LIN54Q6MZP7 749 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 PDPNQ86YL7 162 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 AP3S1Q92572 193 aa14.99□□□□□ -0.01
PKP3-204ENST00000526971 TSSC4Q9Y5U2 329 aaPredicted RBP14.99□□□□□ -0.01
PKP3-204ENST00000526971 J3QRK9 145 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 RRHO14718 337 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 TUSC2O75896 110 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 IGKV1-16P04430 117 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 IGF1P05019 195 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 THBS3P49746 956 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 KRTAP10-11P60412 298 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 TAGLNQ01995 201 aaKnown RBP14.98□□□□□ -0.01
PKP3-204ENST00000526971 MZT2AQ6P582 158 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 CLVS1Q8IUQ0 354 aaPredicted RBP14.98□□□□□ -0.01
PKP3-204ENST00000526971 COMMD1Q8N668 190 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 SNAPC3Q92966 411 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 GON7Q9BXV9 100 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 SLC35D1Q9NTN3 355 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 ZNF580Q9UK33 172 aa14.98□□□□□ -0.01
PKP3-204ENST00000526971 SMIM31A0A1B0GVY4 71 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 WI2-2373I1.2A0A1W2PRP0 233 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 MEIS3P1A6NDR6 274 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 HPGDSO60760 199 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 FCER2P06734 321 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 ELK1P19419 428 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 PRSS3P35030 304 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 RPS16P62249 146 aaKnown RBP14.97□□□□□ -0.01
PKP3-204ENST00000526971 ZNF645Q8N7E2 425 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 FLYWCH2Q96CP2 140 aaKnown RBP14.97□□□□□ -0.01
PKP3-204ENST00000526971 TSNAXQ99598 290 aaKnown RBP14.97□□□□□ -0.01
PKP3-204ENST00000526971 OR51J1Q9H342 316 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 FBXL15Q9H469 300 aa14.97□□□□□ -0.01
PKP3-204ENST00000526971 IGHV7-81A0A0B4J1V7 117 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 IGKV1D-13A0A0B4J2D9 117 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 SLC22A5O76082 557 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 IGKV1-13P0DP09 117 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 DUTP33316 252 aaKnown RBP14.96□□□□□ -0.01
PKP3-204ENST00000526971 TMBIM6P55061 237 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 SPCS2Q15005 226 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 PSG5Q15238 335 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 OR5AP2Q8NGF4 316 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 RAB2BQ8WUD1 216 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 ADTRPQ96IZ2 230 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 BCL7BQ9BQE9 202 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 IFT46Q9NQC8 304 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 ANAPC10Q9UM13 185 aa14.96□□□□□ -0.01
PKP3-204ENST00000526971 MRPS7Q9Y2R9 242 aaKnown RBP14.96□□□□□ -0.01
PKP3-204ENST00000526971 SPDEFO95238 335 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 OR5H8P0DN80 308 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 RRASP10301 218 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 PF4V1P10720 104 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 VDAC1P21796 283 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 FCGR2CP31995 323 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 CFHR3Q02985 330 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 PLGLAQ15195 96 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 KHDC1LQ5JSQ8 128 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 TEX38Q6PEX7 206 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 BVESQ8NE79 360 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 DDB2Q92466 427 aa14.95□□□□□ -0.02
PKP3-204ENST00000526971 METTL1Q9UBP6 276 aaKnown RBP14.95□□□□□ -0.02
PKP3-204ENST00000526971 RBMX2Q9Y388 322 aaKnown RBP14.95□□□□□ -0.02
PKP3-204ENST00000526971 LINC00473A8K010 186 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 FCN1O00602 326 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 IGLV2-14P01704 120 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 NAT1P18440 290 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 AADACP22760 399 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 LGALS7P47929 136 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 CBX3Q13185 183 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 CDK10Q15131 360 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 RTL8BQ17RB0 113 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 TMEM177Q53S58 311 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 ZNF660Q6AZW8 331 aaPredicted RBP14.94□□□□□ -0.02
PKP3-204ENST00000526971 PARP11Q9NR21 331 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 ZFP57Q9NU63 452 aa14.94□□□□□ -0.02
PKP3-204ENST00000526971 FAM25AB3EWG3 89 aa14.93□□□□□ -0.02
PKP3-204ENST00000526971 FAM25CB3EWG5 89 aa14.93□□□□□ -0.02
PKP3-204ENST00000526971 FAM25GB3EWG6 89 aa14.93□□□□□ -0.02
PKP3-204ENST00000526971 ATP6V0E1O15342 81 aa14.93□□□□□ -0.02
PKP3-204ENST00000526971 IGLV2-23P01705 113 aa14.93□□□□□ -0.02
PKP3-204ENST00000526971 RPL23AP62750 156 aaKnown RBP14.93□□□□□ -0.02
PKP3-204ENST00000526971 CX3CL1P78423 397 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms