RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RANBP1P43487 201 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 SERPINB10P48595 397 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 VEGFCP49767 419 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 MXD1Q05195 221 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 TMEM30BQ3MIR4 351 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 ZNF660Q6AZW8 331 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-201ENST00000526271 AWAT2Q6E213 333 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 OR10K2Q6IF99 312 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 CROCCP3Q8IVE0 287 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 SLC25A46Q96AG3 418 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 MS4A10Q96PG2 267 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 YPEL2Q96QA6 119 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 SELENOIQ9C0D9 397 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 KCNK15Q9H427 330 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 STEAP1Q9UHE8 339 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 H0YJW9 148 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 H3BMQ9 156 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 ARPC1BO15143 372 aaKnown RBP10.89□□□□□ -0.67
CPSF1-201ENST00000526271 LDLRAD4O15165 306 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 BPNT1O95861 308 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 HSPB1P04792 205 aaKnown RBP10.89□□□□□ -0.67
CPSF1-201ENST00000526271 OR8U9P0C7N5 309 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 FUT3P21217 361 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 QRFPP83859 136 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 HTD2P86397 168 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 GPR176Q14439 515 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 SPCS2Q15005 226 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 RAB11BQ15907 218 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 HAGHQ16775 308 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 HES5Q5TA89 166 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 SFXN4Q6P4A7 337 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 OR6Q1Q8NGQ2 317 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 FAM46BQ96A09 425 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 AGMATQ9BSE5 352 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 DCSTAMPQ9H295 470 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 PLGRKTQ9HBL7 147 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 SPACA1Q9HBV2 294 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 RETNQ9HD89 108 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 RAB9BQ9NP90 201 aa10.89□□□□□ -0.67
CPSF1-201ENST00000526271 KMT2AQ03164 3969 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 A0A0A6YYD4 124 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 IZUMO1RA6ND01 250 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 A6NHS1 94 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 FAM90A7PA6NKC0 464 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 TMEM14DPA8MWL7 114 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 FAM90A23PA8MXZ1 464 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 PDCD6O75340 191 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 ARSBP15848 533 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 CLDN12P56749 244 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 DEFA5Q01523 94 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 ZNF880Q6PDB4 577 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 LFNGQ8NES3 379 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 DGCR14Q96DF8 476 aaKnown RBP10.88□□□□□ -0.67
CPSF1-201ENST00000526271 MRPS24Q96EL2 167 aaKnown RBP10.88□□□□□ -0.67
CPSF1-201ENST00000526271 ABHD14BQ96IU4 210 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 PALMDQ9NP74 551 aa10.88□□□□□ -0.67
CPSF1-201ENST00000526271 RSL24D1Q9UHA3 163 aaKnown RBP10.88□□□□□ -0.67
CPSF1-201ENST00000526271 HERC2O95714 4834 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 HSPA12AO43301 675 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 NOL3O60936 208 aaKnown RBP10.87□□□□□ -0.67
CPSF1-201ENST00000526271 CA11O75493 328 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 GLAP06280 429 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 RORCP51449 518 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 P2RY14Q15391 338 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 MRGPRG-AS1Q2M3A8 158 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 TRAT1Q6PIZ9 186 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 ZNF554Q86TJ5 538 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 PPP1R27Q86WC6 154 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 DYNC2LI1Q8TCX1 351 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 FAAP24Q9BTP7 215 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 BATF3Q9NR55 127 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 DAPK2Q9UIK4 370 aa10.87□□□□□ -0.67
CPSF1-201ENST00000526271 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 CRTAPO75718 401 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-201ENST00000526271 NAPSAO96009 420 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 CA2P00918 260 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 SCAND1P57086 179 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 TPPP2P59282 170 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 PITPNAQ00169 270 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 UNC119Q13432 240 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 KLF5Q13887 457 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-201ENST00000526271 PSG5Q15238 335 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 AKIRIN2Q53H80 203 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 IDNKQ5T6J7 187 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 LINC00322Q6ZN03 302 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-201ENST00000526271 C6orf201Q7Z4U5 140 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 ZNF383Q8NA42 475 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 KCNG3Q8TAE7 436 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 PTX4Q96A99 478 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 NICN1Q9BSH3 213 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 CST11Q9H112 138 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms