RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MAP3K1Q13233 1512 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 EIF3AQ14152 1382 aaKnown RBP2.45□□□□□ -2.02
CSDE1-211ENST00000525970 SEC16AO15027 2179 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 NCOA1Q15788 1441 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 NLRC5Q86WI3 1866 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 LINC00862A6NCI5 91 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SLC25A20O43772 301 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 KRT75O95678 551 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 MT-CO2P00403 227 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 ALOX5APP20292 161 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CRABP2P29373 138 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CA7P43166 264 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SLCO1A2P46721 670 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 IDH3GP51553 393 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 RPS11P62280 158 aaKnown RBP eCLIP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 IL15RAQ13261 267 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SLC9A3R2Q15599 337 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 PRR9Q5T870 116 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 FAM78BQ5VT40 261 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SBSNQ6UWP8 590 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SLC51BQ86UW2 128 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 UBL4BQ8N7F7 174 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CCDC112Q8NEF3 446 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 MS4A6EQ96DS6 147 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TMA16Q96EY4 203 aaKnown RBP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CPNE2Q96FN4 548 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 IMP4Q96G21 291 aaKnown RBP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TBX5Q99593 518 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TMEM109Q9BVC6 243 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TAS2R1Q9NYW7 299 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 ATG2BQ96BY7 2078 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 PRDM2Q13029 1718 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 ROCK2O75116 1388 aaKnown RBP2.44□□□□□ -2.02
CSDE1-211ENST00000525970 PLEKHH2Q8IVE3 1493 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CECR2Q9BXF3 1484 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 SYNJ1O43426 1573 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 TIAM1Q13009 1591 aa2.44□□□□□ -2.02
CSDE1-211ENST00000525970 CACNA1SQ13698 1873 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 FMN1Q68DA7 1419 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 UACAQ9BZF9 1416 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 ADGRL3Q9HAR2 1447 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 CACNA1DQ01668 2161 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 TRPM3Q9HCF6 1732 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 VIRMAQ69YN4 1812 aaKnown RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 LCTP09848 1927 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 EEF1E1O43324 174 aaKnown RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 IGHMP01871 453 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 OR5G3P0C626 314 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 PRPS1L1P21108 318 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 OMPP47874 163 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 MARCKSL1P49006 195 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 SULT1A1P50225 295 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 TSPAN31Q12999 210 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 PLPPR5Q32ZL2 321 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 MRPL51Q4U2R6 128 aaKnown RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 SPOPLQ6IQ16 392 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 SCXQ7RTU7 201 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 LYPD6Q86Y78 171 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 LRRC25Q8N386 305 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 ZNF664Q8N3J9 261 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 DEFB125Q8N687 156 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 MUC7Q8TAX7 377 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 SLC35B4Q969S0 331 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 OTUB2Q96DC9 234 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 C11orf1Q9H5F2 150 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 CARHSP1Q9Y2V2 147 aaKnown RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 LSM5Q9Y4Y9 91 aaKnown RBP2.43□□□□□ -2.02
CSDE1-211ENST00000525970 ADGRL1O94910 1474 aa2.43□□□□□ -2.02
CSDE1-211ENST00000525970 SPATA31E1Q6ZUB1 1445 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 DSCAMO60469 2012 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 ZNF638Q14966 1978 aaKnown RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 LRRC9Q6ZRR7 1453 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CLDN24A6NM45 220 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 GGTLC3B5MD39 225 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 DISC1C4P0D8 188 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 APOMO95445 188 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CPSF4O95639 269 aaKnown RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 HRES1P13985 223 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 UCHL3P15374 230 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 PPP1CCP36873 323 aaKnown RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 AKR1C2P52895 323 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 TMEM33P57088 247 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 REEP5Q00765 189 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 IFITM2Q01629 132 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 SRSF6Q13247 344 aaKnown RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 AMMECR1LQ6DCA0 310 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 LRRC34Q8IZ02 419 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 KRT222Q8N1A0 295 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CLDN22Q8N7P3 220 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CDC26Q8NHZ8 85 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 SLC2A9Q9NRM0 540 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 HHLA2Q9UM44 414 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 POLR1AO95602 1720 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-211ENST00000525970 SHANK3Q9BYB0 1731 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 ABCA5Q8WWZ7 1642 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 PTPN23Q9H3S7 1636 aa2.42□□□□□ -2.02
CSDE1-211ENST00000525970 CFAP43Q8NDM7 1665 aa2.41□□□□□ -2.02
CSDE1-211ENST00000525970 FLT4P35916 1363 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms