RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 FAM96AQ9H5X1 160 aa3.54□□□□□ -1.84
CD44-220ENST00000525688 PYCARDQ9ULZ3 195 aa3.54□□□□□ -1.84
CD44-220ENST00000525688 NEU3Q9UQ49 428 aa3.54□□□□□ -1.84
CD44-220ENST00000525688 ORC6Q9Y5N6 252 aa3.54□□□□□ -1.84
CD44-220ENST00000525688 MYO18AQ92614 2054 aaKnown RBP3.54□□□□□ -1.84
CD44-220ENST00000525688 ATG2BQ96BY7 2078 aa3.54□□□□□ -1.84
CD44-220ENST00000525688 SPEGQ15772 3267 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 A0A087X0T9 212 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 A0A1B0GXF2 115 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 D6RAR5 112 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 H0Y9J4 135 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 H7C417 338 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 DLEU1O43261 78 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 ZNF253O75346 499 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 YIF1AO95070 293 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PDYNP01213 254 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 TTRP02766 147 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PFN1P07737 140 aaKnown RBP3.53□□□□□ -1.84
CD44-220ENST00000525688 BPGMP07738 259 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 HTR1AP08908 422 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 FBP1P09467 338 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 LAMP1P11279 417 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CD70P32970 193 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 GGT2P36268 569 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CDKN2BP42772 138 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 LGALS7P47929 136 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CACNG7P62955 275 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
CD44-220ENST00000525688 DEFA6Q01524 100 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 LPAL2Q16609 132 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 DNAJC24Q6P3W2 148 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 TBPL2Q6SJ96 375 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 C6orf120Q7Z4R8 191 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 GTSCR1Q86UQ5 136 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.53□□□□□ -1.84
CD44-220ENST00000525688 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 TSTD1Q8NFU3 115 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 OR51A2Q8NGJ7 313 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 ZNRF2Q8NHG8 242 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 MCEEQ96PE7 176 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PPP1R2P1Q96PQ5 205 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 OR2M4Q96R27 311 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 OR52E6Q96RD3 313 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 METTL26Q96S19 204 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 EBF4Q9BQW3 602 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 SLC17A9Q9BYT1 436 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CHST5Q9GZS9 411 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PLSCR3Q9NRY6 295 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 TMEM100Q9NV29 134 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 MTFP1Q9UDX5 166 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 PSG8Q9UQ74 426 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CSAG2Q9Y5P2 127 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 CEP250Q9BV73 2442 aa3.53□□□□□ -1.84
CD44-220ENST00000525688 MUC22E2RYF6 1773 aaPredicted RBP3.53□□□□□ -1.84
CD44-220ENST00000525688 BAHCC1Q9P281 2608 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 TRAV9-2A0A087WT02 112 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 MAP1LC3B2A6NCE7 125 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 EEF1E1-BLOC1S5C9J1V9 151 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 SAP18O00422 153 aaKnown RBP3.52□□□□□ -1.85
CD44-220ENST00000525688 XKRYO14609 159 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 EEF1E1O43324 174 aaKnown RBP3.52□□□□□ -1.85
CD44-220ENST00000525688 GCM2O75603 506 aaPredicted RBP3.52□□□□□ -1.85
CD44-220ENST00000525688 IGLV3-19P01714 112 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR56A5P0C7T3 313 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 SPNP16150 400 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 CXCL2P19875 107 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 AGTR1P30556 359 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 S100A7P31151 101 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 MARCKSL1P49006 195 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 H2BFSP57053 126 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 CD47Q08722 323 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 NSDHLQ15738 373 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 HIGD2BQ4VC39 106 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 TSPO2Q5TGU0 170 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 RSBN1Q5VWQ0 802 aaPredicted RBP3.52□□□□□ -1.85
CD44-220ENST00000525688 FBXW9Q5XUX1 488 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 DCUN1D2Q6PH85 259 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 LRRC28Q86X40 367 aaPredicted RBP3.52□□□□□ -1.85
CD44-220ENST00000525688 CDC20BQ86Y33 519 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 DOLPP1Q86YN1 238 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 FAM71E2Q8N5Q1 922 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 C11orf72Q8NBR9 251 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR10AD1Q8NGE0 317 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR52L1Q8NGH7 329 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR9I1Q8NGQ6 314 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR5J2Q8NH18 312 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 OR1S1Q8NH92 325 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 C1orf54Q8WWF1 131 aa3.52□□□□□ -1.85
CD44-220ENST00000525688 DNAJC9Q8WXX5 260 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms