RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 LAX1Q8IWV1 398 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 AP3S1Q92572 193 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 CITED2Q99967 270 aaPredicted RBP9.41□□□□□ -0.9
CLN8-207ENST00000524258 SOSTQ9BQB4 213 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 SCPEP1Q9HB40 452 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 LINC00527Q9UJ94 153 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 ZNF580Q9UK33 172 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 RBMX2Q9Y388 322 aaKnown RBP9.41□□□□□ -0.9
CLN8-207ENST00000524258 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
CLN8-207ENST00000524258 J3QRK9 145 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 SULT1C2O00338 296 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 RRHO14718 337 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 FBXO24O75426 580 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 TSPAN15O95858 294 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 PPYP01298 95 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 IGF1P05019 195 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 EGR2P11161 476 aaPredicted RBP9.4□□□□□ -0.9
CLN8-207ENST00000524258 FCGR2CP31995 323 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 RFX2P48378 723 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
CLN8-207ENST00000524258 NDPQ00604 133 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 DYRK1AQ13627 763 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 CDK10Q15131 360 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 PSG5Q15238 335 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 MSMO1Q15800 293 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 TMEM177Q53S58 311 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 SLC35E3Q7Z769 313 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 PDPNQ86YL7 162 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 SNX29P2Q8IUI4 249 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 STPG2Q8N412 459 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 FBXL15Q9H469 300 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 NECAP2Q9NVZ3 263 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 MRPS7Q9Y2R9 242 aaKnown RBP9.4□□□□□ -0.9
CLN8-207ENST00000524258 NOTCH3Q9UM47 2321 aa9.4□□□□□ -0.9
CLN8-207ENST00000524258 TNCP24821 2201 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 SMIM31A0A1B0GVY4 71 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
CLN8-207ENST00000524258 SOX6P35712 828 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 THBS3P49746 956 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
CLN8-207ENST00000524258 ARPC4P59998 168 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
CLN8-207ENST00000524258 ZNF329Q86UD4 541 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 BVESQ8NE79 360 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 CCL28Q9NRJ3 127 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 SLC35D1Q9NTN3 355 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 EXTL2Q9UBQ6 330 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 FBXO7Q9Y3I1 522 aa9.39□□□□□ -0.91
CLN8-207ENST00000524258 FAM25AB3EWG3 89 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 FAM25CB3EWG5 89 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 FAM25GB3EWG6 89 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 H7C2Y5 167 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 ZNF701M0R085 212 aaPredicted RBP9.38□□□□□ -0.91
CLN8-207ENST00000524258 AP4M1O00189 453 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 SLC22A5O76082 557 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 PMP2P02689 132 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 CX3CL1P78423 397 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
CLN8-207ENST00000524258 LIN54Q6MZP7 749 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 RNF152Q8N8N0 203 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 GPHA2Q96T91 129 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 OR51J1Q9H342 316 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 IFT46Q9NQC8 304 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 KLK11Q9UBX7 282 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 MTFP1Q9UDX5 166 aa9.38□□□□□ -0.91
CLN8-207ENST00000524258 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 M0QZ24 198 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 KCNAB3O43448 404 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 SPDEFO95238 335 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 APOA2P02652 100 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 HLA-DMAP28067 261 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 GNRHRP30968 328 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 RCVRNP35243 200 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 HRH1P35367 487 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 LGALS7P47929 136 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 RPS16P62249 146 aaKnown RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 PJVKQ0ZLH3 352 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 KIAA0141Q14154 515 aaPredicted RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 NUBP2Q9Y5Y2 271 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 TET2Q6N021 2002 aaPredicted RBP9.37□□□□□ -0.91
CLN8-207ENST00000524258 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
CLN8-207ENST00000524258 G3V318 75 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 ARPC1BO15143 372 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms