RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 RPS3P23396 243 aaKnown RBP eCLIP3.33□□□□□ -1.886e-15■□□□□ 10.6
SKP1-211ENST00000523359 FMO3P31513 532 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 PSMB2P49721 201 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LHX2P50458 406 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 CTBP2P56545 445 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 PIGPP57054 158 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 SYNJ2BPP57105 145 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LCN6P62502 163 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ZNF616Q08AN1 781 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 BAMBIQ13145 260 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ARFRP1Q13795 201 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ENDOGQ14249 297 aaKnown RBP3.33□□□□□ -1.88
SKP1-211ENST00000523359 C12orf74Q32Q52 190 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LINC00303Q3SY05 128 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ZNF404Q494X3 552 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ATP6AP1LQ52LC2 224 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 TNFAIP8L3Q5GJ75 292 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 GLYATQ6IB77 296 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 Q6ZSR6 202 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 GDPD1Q8N9F7 314 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 DCAF4L2Q8NA75 395 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 SLC30A7Q8NEW0 376 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 OR5K1Q8NHB7 308 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LRRC29Q8WV35 223 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 CANT1Q8WVQ1 401 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ACOT12Q8WYK0 555 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ROPN1LQ96C74 230 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 TMEM101Q96IK0 257 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 OR7D2Q96RA2 312 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 LYSMD1Q96S90 227 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 GABARAPL3Q9BY60 117 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 TBL1XR1Q9BZK7 514 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 POLR2J2Q9GZM3 115 aaKnown RBP3.33□□□□□ -1.88
SKP1-211ENST00000523359 SLC25A31Q9H0C2 315 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 POLR2J3Q9H1A7 115 aaKnown RBP3.33□□□□□ -1.88
SKP1-211ENST00000523359 OR52D1Q9H346 318 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 UQCC1Q9NVA1 299 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 RBM12B-AS1Q9P1G2 102 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 HSPB8Q9UJY1 196 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 SLC25A15Q9Y619 301 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 NFASCO94856 1347 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ZNF609O15014 1411 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 ERBINQ96RT1 1412 aa3.33□□□□□ -1.88
SKP1-211ENST00000523359 SCAF11Q99590 1463 aaKnown RBP3.33□□□□□ -1.88
SKP1-211ENST00000523359 IGKV1-27A0A075B6S5 117 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 A0A087WUU8 490 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TRAV8-3A0A0A6YYJ7 113 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 IGHV2-26A0A0B4J1V2 119 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 IGHV1-69DA0A0B4J2H0 117 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TMEM189A5PLL7 270 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 KRTAP4-16G5E9R7 235 aaPredicted RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 K7EPK0 472 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 ISLRO14498 428 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TCF21O43680 179 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 ZNF780AO75290 641 aaPredicted RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 DBIP07108 87 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 UBBP0CG47 229 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 APLNRP35414 380 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 POLR2IP36954 125 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 RBP2P50120 134 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 P2RX1P51575 399 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 NCALDP61601 193 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TMEM267Q0VDI3 215 aaPredicted RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 ERCC8Q13216 396 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 C6orf99Q4VX62 202 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 IBA57Q5T440 356 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 ZNF664Q8N3J9 261 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 OR5A1Q8NGJ0 315 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 OR1L1Q8NH94 360 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 GEMIN6Q8WXD5 167 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 RPUSD4Q96CM3 377 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 NEURL3Q96EH8 262 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 GPR82Q96P67 336 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 ZNF649Q9BS31 505 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TMEM70Q9BUB7 260 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 MND1Q9BWT6 205 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 PBOV1Q9GZY1 135 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 HMG20AQ9NP66 347 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 GPR84Q9NQS5 396 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TMEM216Q9P0N5 145 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 SSR3Q9UNL2 185 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 ENPP4Q9Y6X5 453 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 RAPGEF2Q9Y4G8 1499 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 KDM6BO15054 1643 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 COL16A1Q07092 1604 aaPredicted RBP3.32□□□□□ -1.88
SKP1-211ENST00000523359 THSD7AQ9UPZ6 1657 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 CHD1O14646 1710 aa3.32□□□□□ -1.88
SKP1-211ENST00000523359 TSPOAP1O95153 1857 aa3.31□□□□□ -1.88
SKP1-211ENST00000523359 PHLPP1O60346 1717 aa3.31□□□□□ -1.88
SKP1-211ENST00000523359 ADGBQ8N7X0 1667 aa3.31□□□□□ -1.88
SKP1-211ENST00000523359 ZMYM4Q5VZL5 1548 aa3.31□□□□□ -1.88
SKP1-211ENST00000523359 GAPVD1Q14C86 1478 aa3.31□□□□□ -1.88
SKP1-211ENST00000523359 NOS1P29475 1434 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms