RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 GINS4Q9BRT9 223 aa11.78□□□□□ -0.52
PCM1-218ENST00000523055 GHITMQ9H3K2 345 aa11.78□□□□□ -0.52
PCM1-218ENST00000523055 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
PCM1-218ENST00000523055 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
PCM1-218ENST00000523055 GAR1Q9NY12 217 aaKnown RBP11.78□□□□□ -0.52
PCM1-218ENST00000523055 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
PCM1-218ENST00000523055 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 NUDT19A8MXV4 375 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 FCN1O00602 326 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 RRHO14718 337 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 DIRAS3O95661 229 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 FCER2P06734 321 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 VDAC1P21796 283 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 SCAND1P57086 179 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 NCS1P62166 190 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 ARL6IP1Q15041 203 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 SRSF7Q16629 238 aaKnown RBP eCLIP11.77□□□□□ -0.52
PCM1-218ENST00000523055 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 DEFB136Q30KP8 78 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 LIN54Q6MZP7 749 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 TEX38Q6PEX7 206 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 FUNDC2Q9BWH2 189 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 OR51J1Q9H342 316 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 GAB2Q9UQC2 676 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 U3KQK5 164 aa11.77□□□□□ -0.52
PCM1-218ENST00000523055 SCGNO76038 276 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 IGHG4P01861 327 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 NFYAP23511 347 aaPredicted RBP11.77□□□□□ -0.53
PCM1-218ENST00000523055 MC5RP33032 325 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 COMMD1Q8N668 190 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 GVQW1Q8N7I0 195 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.77□□□□□ -0.53
PCM1-218ENST00000523055 RCC1LQ96I51 464 aaKnown RBP11.77□□□□□ -0.53
PCM1-218ENST00000523055 CLCC1Q96S66 551 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 SLC35D1Q9NTN3 355 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 SPATA2Q9UM82 520 aa11.77□□□□□ -0.53
PCM1-218ENST00000523055 RBM7Q9Y580 266 aaKnown RBP11.77□□□□□ -0.53
PCM1-218ENST00000523055 STARD9Q9P2P6 4700 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 PSMB8P28062 276 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 PPIFP30405 207 aaKnown RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 THBS3P49746 956 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 VBP1P61758 197 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 CX3CL1P78423 397 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 FOXE3Q13461 319 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 PLGLAQ15195 96 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 PSG5Q15238 335 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 ECSCRQ19T08 205 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 CASTOR1Q8WTX7 329 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 NAA50Q9GZZ1 169 aaKnown RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 DCSTAMPQ9H295 470 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 METTL1Q9UBP6 276 aaKnown RBP11.76□□□□□ -0.53
PCM1-218ENST00000523055 A3GALT2U3KPV4 340 aa11.76□□□□□ -0.53
PCM1-218ENST00000523055 IGKV1D-13A0A0B4J2D9 117 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 LINC00473A8K010 186 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 SLC25A17O43808 307 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 RBBP9O75884 186 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 APOA2P02652 100 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 IGKV1-13P0DP09 117 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
PCM1-218ENST00000523055 PITPNAQ00169 270 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 RNF152Q8N8N0 203 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 OR13F1Q8NGS4 319 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 AUNIPQ9H7T9 357 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 ZNF580Q9UK33 172 aa11.75□□□□□ -0.53
PCM1-218ENST00000523055 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 SOX15O60248 233 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
PCM1-218ENST00000523055 CA2P00918 260 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 ELANEP08246 267 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
PCM1-218ENST00000523055 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
PCM1-218ENST00000523055 C19orf54Q5BKX5 351 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 CNIH2Q6PI25 160 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 SAMD12Q8N8I0 201 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 BVESQ8NE79 360 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 DDB2Q92466 427 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 RAX2Q96IS3 184 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 OR2W1Q9Y3N9 320 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 CSMD3Q7Z407 3707 aa11.74□□□□□ -0.53
PCM1-218ENST00000523055 IGLV2-14P01704 120 aa11.73□□□□□ -0.53
PCM1-218ENST00000523055 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
PCM1-218ENST00000523055 OR5H8P0DN80 308 aa11.73□□□□□ -0.53
PCM1-218ENST00000523055 DUTP33316 252 aaKnown RBP11.73□□□□□ -0.53
PCM1-218ENST00000523055 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
PCM1-218ENST00000523055 BEST4Q8NFU0 473 aa11.73□□□□□ -0.53
PCM1-218ENST00000523055 ABHD5Q8WTS1 349 aa11.73□□□□□ -0.53
PCM1-218ENST00000523055 SNAPC3Q92966 411 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms