RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 RBM7Q9Y580 266 aaKnown RBP12.88□□□□□ -0.35
PABPC1-221ENST00000522720 IGHV7-81A0A0B4J1V7 117 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 RRHO14718 337 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 XRCC3O43542 346 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 APOA2P02652 100 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 PF4V1P10720 104 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 RPL23AP62750 156 aaKnown RBP12.87□□□□□ -0.35
PABPC1-221ENST00000522720 DEFA6Q01524 100 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 CFHR3Q02985 330 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 UBE2NLQ5JXB2 153 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 OR51J1Q9H342 316 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 CCDC59Q9P031 241 aaKnown RBP12.87□□□□□ -0.35
PABPC1-221ENST00000522720 A3GALT2U3KPV4 340 aa12.87□□□□□ -0.35
PABPC1-221ENST00000522720 IGHG4P01861 327 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 ELANEP08246 267 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 OR5H8P0DN80 308 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 VDAC1P21796 283 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 NFYAP23511 347 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-221ENST00000522720 TAGLNQ01995 201 aaKnown RBP12.86□□□□□ -0.35
PABPC1-221ENST00000522720 FOXE3Q13461 319 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 PSG5Q15238 335 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 BEST4Q8NFU0 473 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 FLYWCH2Q96CP2 140 aaKnown RBP12.86□□□□□ -0.35
PABPC1-221ENST00000522720 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
PABPC1-221ENST00000522720 FBXL15Q9H469 300 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 OR2W1Q9Y3N9 320 aa12.86□□□□□ -0.35
PABPC1-221ENST00000522720 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 SLC6A1P30531 599 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 THBS3P49746 956 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 RPS16P62249 146 aaKnown RBP12.85□□□□□ -0.35
PABPC1-221ENST00000522720 CX3CL1P78423 397 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 ZNF660Q6AZW8 331 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-221ENST00000522720 GVQW1Q8N7I0 195 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 ADTRPQ96IZ2 230 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 WSB1Q9Y6I7 421 aa12.85□□□□□ -0.35
PABPC1-221ENST00000522720 J3QRK9 145 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 FCN1O00602 326 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 ATP6V0E1O15342 81 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 TUSC2O75896 110 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 SPDEFO95238 335 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 PTHLHP12272 177 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 CBX5P45973 191 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 LGALS7P47929 136 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 LUMP51884 338 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-221ENST00000522720 PLGLAQ15195 96 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 CXorf66Q5JRM2 361 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-221ENST00000522720 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 C1QL4Q86Z23 238 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 CMTM3Q96MX0 182 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
PABPC1-221ENST00000522720 METTL1Q9UBP6 276 aaKnown RBP12.84□□□□□ -0.35
PABPC1-221ENST00000522720 G3V318 75 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 G3V4G9 280 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 SLC22A5O76082 557 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 PF4P02776 101 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
PABPC1-221ENST00000522720 RRASP10301 218 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 PSMB8P28062 276 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 PPIFP30405 207 aaKnown RBP12.83□□□□□ -0.36
PABPC1-221ENST00000522720 DUTP33316 252 aaKnown RBP12.83□□□□□ -0.36
PABPC1-221ENST00000522720 S100A5P33763 92 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-221ENST00000522720 ARPC4P59998 168 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 TMEM69Q5SWH9 247 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 SAMD5Q5TGI4 173 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 ZNF562Q6V9R5 426 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 C18orf65Q6ZTR6 163 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 ZNF645Q8N7E2 425 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 BVESQ8NE79 360 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 MCFD2Q8NI22 146 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 DDB2Q92466 427 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 COMMD3Q9UBI1 195 aa12.83□□□□□ -0.36
PABPC1-221ENST00000522720 TNCP24821 2201 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 LINC00473A8K010 186 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 NUDT19A8MXV4 375 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 SLC25A17O43808 307 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 APOA1P02647 267 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 CDX1P47902 265 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-221ENST00000522720 TAS2R20P59543 309 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 NDPQ00604 133 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 CBX3Q13185 183 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 RTL8BQ17RB0 113 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
PABPC1-221ENST00000522720 ZNF695Q8IW36 515 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms