RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 IGLV2-23P01705 113 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 CRYGBP07316 175 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 CD3GP09693 182 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 SPNP16150 400 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 PSMD7P51665 324 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 FXYD3Q14802 87 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 MOGAT2Q3SYC2 334 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 IGSF11Q5DX21 431 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 HES5Q5TA89 166 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 PDPNQ86YL7 162 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-205ENST00000519623 OR4A4PQ8NGN8 299 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 ARPC1AQ92747 370 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 FLYWCH2Q96CP2 140 aaKnown RBP9.57□□□□□ -0.88
CSMD1-205ENST00000519623 CCDC90BQ9GZT6 254 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 SLA2Q9H6Q3 261 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 ACOT13Q9NPJ3 140 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 RYR3Q15413 4870 aa9.57□□□□□ -0.88
CSMD1-205ENST00000519623 TRBV6-7A0A0A0MS04 114 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SHISA3A0PJX4 238 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 M0R1X1 148 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 FABP7O15540 132 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SLC25A17O43808 307 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 APOA2P02652 100 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 OR8U9P0C7N5 309 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 GSTT2P0CG29 244 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 GSTT2BP0CG30 244 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 GP9P14770 177 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 LGALS7P47929 136 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SERPINB10P48595 397 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 TPPP2P59282 170 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SSX1Q16384 188 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 RAB3CQ96E17 227 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 C5orf30Q96GV9 206 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SLC35D1Q9NTN3 355 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 SDHAF2Q9NX18 166 aa9.56□□□□□ -0.88
CSMD1-205ENST00000519623 TRAV1-2A0A0B4J238 106 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 SRRM4A7MD48 611 aaKnown RBP9.55□□□□□ -0.88
CSMD1-205ENST00000519623 RAB27BO00194 218 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 BET1O15155 118 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 TRGV3P03979 118 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 FCGR3AP08637 254 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 CD40LGP29965 261 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 RANBP1P43487 201 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 OR10A3P58181 314 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 MRGPRG-AS1Q2M3A8 158 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 OR5T1Q8NG75 326 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 GRPEL2Q8TAA5 225 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 CABLES2Q9BTV7 478 aa9.55□□□□□ -0.88
CSMD1-205ENST00000519623 ZNF230Q9UIE0 474 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-205ENST00000519623 TRIM64CA6NLI5 447 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 IFITM5A6NNB3 132 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 MFNGO00587 321 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 DIRAS3O95661 229 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 FRMD6-AS1P0C7T7 363 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 GNB3P16520 340 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 TBCEQ15813 527 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-205ENST00000519623 TMEM177Q53S58 311 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 POC5Q8NA72 575 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 OR6Q1Q8NGQ2 317 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 OR10J5Q8NHC4 309 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 OR4C12Q96R67 309 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 OR2D2Q9H210 308 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 RANGRFQ9HD47 186 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-205ENST00000519623 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
CSMD1-205ENST00000519623 A0A0B4J203 849 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 TRDV1A0A1B0GX56 115 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 H3BUA1 57 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 PDCD5O14737 125 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 CNIH1O95406 144 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 BRI3O95415 125 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 IGLV1-51P01701 117 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 HIST1H1DP16402 221 aaKnown RBP9.53□□□□□ -0.88
CSMD1-205ENST00000519623 RAB6AP20340 208 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 MRPS15P82914 257 aaKnown RBP9.53□□□□□ -0.88
CSMD1-205ENST00000519623 PITPNAQ00169 270 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
CSMD1-205ENST00000519623 KLF5Q13887 457 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-205ENST00000519623 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSMD1-205ENST00000519623 Q6ZS49 121 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 ZNF367Q7RTV3 350 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 NR2C2APQ86WQ0 139 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 Q8N1Y9 231 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 BVESQ8NE79 360 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 MAFIPQ8WZ33 124 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 DDB2Q92466 427 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 TMEM68Q96MH6 324 aa9.53□□□□□ -0.88
CSMD1-205ENST00000519623 A0A075B6Q4 140 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 IGKV1D-8A0A087WSZ0 117 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 A0A0G2JLM5 398 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 C13orf42A0A1B0GVH6 325 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 ANKRD34BA5PLL1 514 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 ZP3P21754 424 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 GADD45AP24522 165 aa9.52□□□□□ -0.89
CSMD1-205ENST00000519623 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms