RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 GPR32P1Q8NGA4 272 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 ZNRF2Q8NHG8 242 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 ASB13Q8WXK3 278 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 RAB8BQ92930 207 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 GALMQ96C23 342 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 PPCDCQ96CD2 204 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 TLCD1Q96CP7 247 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 CCDC42Q96M95 316 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 TMEM208Q9BTX3 173 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 UBQLN4Q9NRR5 601 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 SNAPC4Q5SXM2 1469 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 CLUHO75153 1309 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 TTC21AQ8NDW8 1320 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 GBF1Q92538 1859 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 PTPRKQ15262 1439 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 H3BRN7 92 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 K7EQS6 105 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 LYPLA2O95372 231 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 IFNA16P05015 189 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 RPS17P08708 135 aaKnown RBP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 OR4A8P0C604 315 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 IGHV3-30-3P0DP02 117 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 HIST1H1EP10412 219 aaKnown RBP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 CTSEP14091 401 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 PSMA1P25786 263 aaKnown RBP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 IDH3GP51553 393 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 GTF2BQ00403 316 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 TNFAIP8L2Q6P589 184 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 TESCQ96BS2 214 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 UPK3BQ9BT76 320 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 CHST5Q9GZS9 411 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 VCX3BQ9H321 246 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 MAP1LC3AQ9H492 121 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 SMDT1Q9H4I9 107 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 DMAC2Q9NW81 257 aa1.92□□□□□ -2.1
PTPN12-213ENST00000519553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.92□□□□□ -2.1
PTPN12-213ENST00000519553 METTL15A6NJ78 407 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 KCNK1O00180 336 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 SOD1P00441 154 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 HLA-DRAP01903 254 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 CFL1P23528 166 aaKnown RBP1.91□□□□□ -2.1
PTPN12-213ENST00000519553 MIPP30301 263 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 RCVRNP35243 200 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 PPP1R2P41236 205 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 OMPP47874 163 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 CXCR4P61073 352 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 VBP1P61758 197 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 RANP62826 216 aaKnown RBP1.91□□□□□ -2.1
PTPN12-213ENST00000519553 DYNLL1P63167 89 aaKnown RBP1.91□□□□□ -2.1
PTPN12-213ENST00000519553 HIST3H3Q16695 136 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 PPP1R2P3Q6NXS1 205 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 XKRXQ6PP77 449 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 TRAPPC5Q8IUR0 188 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 OR5B17Q8NGF7 314 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 ERMNQ8TAM6 284 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 SLC37A2Q8TED4 501 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 C16orf78Q8WTQ4 265 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 TAMM41Q96BW9 452 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 ATPIF1Q9UII2 106 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 EVC2Q86UK5 1308 aa1.91□□□□□ -2.1
PTPN12-213ENST00000519553 FBN3Q75N90 2809 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 TEX50A0A1B0GTY4 177 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 C19orf71A6NCJ1 209 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 B4DEV8 164 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 H3BSA7 217 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 KPNA3O00505 521 aaPredicted RBP1.9□□□□□ -2.11
PTPN12-213ENST00000519553 FBP1P09467 338 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 MYL12AP19105 171 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 RPS12P25398 132 aaKnown RBP1.9□□□□□ -2.11
PTPN12-213ENST00000519553 RPL12P30050 165 aaKnown RBP1.9□□□□□ -2.11
PTPN12-213ENST00000519553 AGTR1P30556 359 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 RWDD2BP57060 319 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 GABARAPL2P60520 117 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 GLO1Q04760 184 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 AESQ08117 197 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 SMAGPQ0VAQ4 97 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 SRSF6Q13247 344 aaKnown RBP1.9□□□□□ -2.11
PTPN12-213ENST00000519553 OR2F1Q13607 317 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 CLVS2Q5SYC1 327 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 VN1R4Q7Z5H5 301 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 EBNA1BP2Q99848 306 aaKnown RBP1.9□□□□□ -2.11
PTPN12-213ENST00000519553 SLC2A9Q9NRM0 540 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 DOCK10Q96BY6 2186 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 ZFYVE9O95405 1425 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 PTPRJQ12913 1337 aa1.9□□□□□ -2.11
PTPN12-213ENST00000519553 VPS37CA5D8V6 355 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-213ENST00000519553 ZNF860A6NHJ4 632 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 FADS1O60427 444 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 KRT75O95678 551 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 LINC00614P0C842 121 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 H2BFSP57053 126 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 RAB5BP61020 215 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 DR1Q01658 176 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 TMED2Q15363 201 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 STX12Q86Y82 276 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 ZBTB8OSQ8IWT0 167 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 OR10D3Q8NH80 312 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 OR5K1Q8NHB7 308 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 CYGBQ8WWM9 190 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms