RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FAIMQ9NVQ4 179 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 DMAC2Q9NW81 257 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 COA4Q9NYJ1 87 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 RSL24D1Q9UHA3 163 aaKnown RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 BTRCQ9Y297 605 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 RBM7Q9Y580 266 aaKnown RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 AKAP11Q9UKA4 1901 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 UBR3Q6ZT12 1888 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TRPM7Q96QT4 1865 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 KIF13BQ9NQT8 1826 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 LTN1O94822 1766 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 RGPD2P0DJD1 1756 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 KCPQ6ZWJ8 1503 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ATP7BP35670 1465 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 RTL1A6NKG5 1358 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TRAV8-2A0A0B4J237 113 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 A0A0G2JLM5 398 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 C9orf170A2RU37 121 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 UPK2O00526 184 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 MRASO14807 208 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 DEGS1O15121 323 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 REM1O75628 298 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TNFSF13O75888 250 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 CDRT1O95170 752 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 NDUFC2O95298 119 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TTRP02766 147 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 UBBP0CG47 229 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 SPI1P17947 270 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 GGT1P19440 569 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 RAB3BP20337 219 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-207ENST00000518569 PSMB2P49721 201 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 AKR1D1P51857 326 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 PFN3P60673 137 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 RAP1AP62834 184 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 HBG1P69891 147 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 HBG2P69892 147 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 PSG4Q00888 419 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TCP10Q12799 353 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 CEACAM16Q2WEN9 425 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 LRRC10Q5BKY1 277 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TFDP3Q5H9I0 405 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TSPO2Q5TGU0 170 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 STEAP4Q687X5 459 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TMEM215Q68D42 235 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 NANOGP8Q6NSW7 305 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 EPGNQ6UW88 154 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 SCGB1D4Q6XE38 83 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 NAA40Q86UY6 237 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 C20orf196Q8IYI0 205 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TMEM61Q8N0U2 210 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 CHST4Q8NCG5 386 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 OR5A1Q8NGJ0 315 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 OR52E2Q8NGJ4 325 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 OR10G4Q8NGN3 311 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 OR4C6Q8NH72 309 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF675Q8TD23 568 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 BLNKQ8WV28 456 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 MALSU1Q96EH3 234 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 EMC6Q9BV81 110 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF471Q9BX82 626 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-207ENST00000518569 SH3BGRL3Q9H299 93 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 SRMSQ9H3Y6 488 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 POMKQ9H5K3 350 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 TMEM9BQ9NQ34 198 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ACER3Q9NUN7 267 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 IDI2-AS1Q9NZ38 188 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 UBIAD1Q9Y5Z9 338 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 KCNE3Q9Y6H6 103 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF780BQ9Y6R6 833 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 ITGB4P16144 1822 aa2.28□□□□□ -2.04
VPS13B-207ENST00000518569 QRICH2Q9H0J4 1663 aa2.28□□□□□ -2.05
VPS13B-207ENST00000518569 CICQ96RK0 1608 aaPredicted RBP2.28□□□□□ -2.05
VPS13B-207ENST00000518569 COL6A3P12111 3177 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 HFM1A2PYH4 1435 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 PIK3C2GO75747 1445 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SSH2Q76I76 1423 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 IGLV4-69A0A075B6H9 119 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 C20orf202A1L168 122 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 C5orf49A4QMS7 147 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TMEM189A5PLL7 270 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TRAPPC13A5PLN9 417 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 C12orf77C9JDV5 145 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 F6UB75 175 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 H7C1C5 153 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 J3KT08 172 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 RGS5O15539 181 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 PIAS1O75925 651 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 YIF1AO95070 293 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 C1QCP02747 245 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CTSLP07711 333 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR4A8P0C604 315 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR56A5P0C7T3 313 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CD37P11049 281 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 GABRA1P14867 456 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF25P17030 456 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms