RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 RAMP3O60896 148 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 HKR1P10072 659 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 KIR2DS2P43631 304 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 P2RY1P47900 373 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 GNG10P50151 68 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 B2MP61769 119 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 ZNF816Q0VGE8 651 aaPredicted RBP16.52■□□□□ 0.23
TRIO-223ENST00000515710 RPL39P5Q59GN2 51 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 NCR3LG1Q68D85 454 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 LYG1Q8N1E2 194 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 REG4Q9BYZ8 158 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 PRELID3BQ9Y3B1 194 aa16.52■□□□□ 0.23
TRIO-223ENST00000515710 IGSF10Q6WRI0 2623 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 A0A1W2PPE3 182 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 MFSD2BA6NFX1 497 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 MSGN1A6NI15 193 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 CFDP00746 253 aaPredicted RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 RNF224P0DH78 156 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 PVALBP20472 110 aaPredicted RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 UBA52P62987 128 aaKnown RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 OR2B11Q5JQS5 317 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 ODF3L1Q8IXM7 274 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 C8orf31Q8N9H6 132 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 ADTRPQ96IZ2 230 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 ZC4H2Q9NQZ6 224 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 KALRNO60229 2985 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 RBFOX2O43251 390 aaKnown RBP eCLIP16.51■□□□□ 0.236e-8■■■□□ 19
TRIO-223ENST00000515710 MMP9P14780 707 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 EPHA1P21709 976 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 RPL12P30050 165 aaKnown RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 THBS3P49746 956 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 CXorf66Q5JRM2 361 aaPredicted RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 WDR25Q64LD2 544 aaPredicted RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 DMBX1Q8NFW5 382 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 C8orf46Q8TAG6 207 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 S1PR3Q99500 378 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 ZNF251Q9BRH9 671 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 PATZ1Q9HBE1 687 aaKnown RBP16.51■□□□□ 0.23
TRIO-223ENST00000515710 SESN1Q9Y6P5 492 aa16.51■□□□□ 0.23
TRIO-223ENST00000515710 A0A087X0M5 115 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 SAA2-SAA4A0A096LPE2 208 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 A0A1B0GX30 115 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 OVOL3O00110 214 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 S1PR2O95136 353 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 HPRT1P00492 218 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 SAA2P0DJI9 122 aaPredicted RBP16.5■□□□□ 0.23
TRIO-223ENST00000515710 GPR157Q5UAW9 335 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 COA4Q9NYJ1 87 aa16.5■□□□□ 0.23
TRIO-223ENST00000515710 F5H0A9 414 aaPredicted RBP16.49■□□□□ 0.23
TRIO-223ENST00000515710 TAAR5O14804 337 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 GPR6P46095 362 aaPredicted RBP16.49■□□□□ 0.23
TRIO-223ENST00000515710 ERVFRD-1P60508 538 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 Q6ZRM9 215 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 LINC00311Q8N616 119 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.49■□□□□ 0.23
TRIO-223ENST00000515710 ZNF596Q8TC21 504 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 ZNF471Q9BX82 626 aaPredicted RBP16.49■□□□□ 0.23
TRIO-223ENST00000515710 C11orf1Q9H5F2 150 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 CACNG5Q9UF02 275 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 GPR137BO60478 399 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 FCGR3BO75015 233 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 LINC00205P59089 165 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 POLR2GP62487 172 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRIO-223ENST00000515710 C1orf229Q6ZS94 237 aaPredicted RBP16.49■□□□□ 0.23
TRIO-223ENST00000515710 DDB2Q92466 427 aa16.49■□□□□ 0.23
TRIO-223ENST00000515710 A8MXK9 166 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 WRBO00258 174 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 TSPAN4O14817 238 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 KRASP01116 189 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 RBP4P02753 201 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 P0C879 139 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 IGHV1-8P0DP01 117 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 G6PCP35575 357 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 EIF4E3Q8N5X7 224 aaKnown RBP16.48■□□□□ 0.23
TRIO-223ENST00000515710 ST8SIA2Q92186 375 aa16.48■□□□□ 0.23
TRIO-223ENST00000515710 PPIAL4CA0A0B4J2A2 164 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 KIAA1324LA8MWY0 1029 aaPredicted RBP16.47■□□□□ 0.23
TRIO-223ENST00000515710 PPIAL4GP0DN37 164 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 VAMP2P63027 116 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 LINC00518Q8N0U6 118 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 C11orf42Q8N5U0 333 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 LY6G5BQ8NDX9 201 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 ABCA4P78363 2273 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 FAM90A26D6RGX4 464 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 J3QR06 171 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 NDUFS7O75251 213 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 SPDEFO95238 335 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 GNB2P62879 340 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 IZUMO4Q1ZYL8 232 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 SCARB1Q8WTV0 552 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 MAGT1Q9H0U3 335 aa16.47■□□□□ 0.23
TRIO-223ENST00000515710 ARHGDIBP52566 201 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 ZNF833PQ6ZTB9 187 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 H2BFWTQ7Z2G1 175 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 OR4S2Q8NH73 311 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 OR9G1Q8NH87 305 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 STOML3Q8TAV4 291 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 IGFBPL1Q8WX77 278 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 R3HDM4Q96D70 268 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 TMEM133Q9H2Q1 129 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms