RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 AKAIN1P0CW23 69 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 THBS3P49746 956 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 ZNF45Q02386 682 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 ARRDC1Q8N5I2 433 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 TRIM63Q969Q1 353 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 ADTRPQ96IZ2 230 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 RITA1Q96K30 269 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 NPFFR1Q9GZQ6 430 aa16.77■□□□□ 0.28
NEIL3-202ENST00000513321 APOA2P02652 100 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 AMY2AP04746 511 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 GNRHRP30968 328 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 BLCAPP62952 87 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 MEF2DQ14814 521 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 MSMO1Q15800 293 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 FAAP20Q6NZ36 180 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 Q6ZSV7 163 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 GDPD1Q8N9F7 314 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 ZBTB34Q8NCN2 500 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 FXYD6Q9H0Q3 95 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 MOB4Q9Y3A3 225 aa16.76■□□□□ 0.27
NEIL3-202ENST00000513321 TMEM89A2RUT3 159 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 NCBP2LA6PVI3 153 aaKnown RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 LINC00473A8K010 186 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 NDUFA7O95182 113 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 ZNF735P0CB33 412 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 F2RL1P55085 397 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 RAG2P55895 527 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 AADACL3Q5VUY0 350 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 ZNF818PQ6ZRF7 136 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 MFSD4AQ8N468 514 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 OR4C16Q8NGL9 310 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 GPHA2Q96T91 129 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 PLSCR3Q9NRY6 295 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 SLC35D1Q9NTN3 355 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 M0QZK8 103 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 TSPAN9O75954 239 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 AMY1AP04745 511 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 RPL30P62888 115 aaKnown RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 TAGLNQ01995 201 aaKnown RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 EIF4EBP1Q13541 118 aaPredicted RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 BVESQ8NE79 360 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 OR8H1Q8NGG4 311 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 OR4C13Q8NGP0 309 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 DDB2Q92466 427 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 BORCS5Q969J3 196 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 SDHCQ99643 169 aaPredicted RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 HSD17B10Q99714 261 aaKnown RBP16.75■□□□□ 0.27
NEIL3-202ENST00000513321 AKIP1Q9NQ31 210 aa16.75■□□□□ 0.27
NEIL3-202ENST00000513321 DISC1C4P0D8 188 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 TNFSF12O43508 249 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 IGKV1-16P04430 117 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 UCP3P55916 312 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 KLF9Q13886 244 aaPredicted RBP16.74■□□□□ 0.27
NEIL3-202ENST00000513321 BAK1Q16611 211 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 SCGB2B2Q4G0G5 96 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 LPCAT3Q6P1A2 487 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 C11orf88Q6PI97 169 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 ZNF66Q6ZN08 573 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 LHFPL1Q86WI0 220 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 PDPNQ86YL7 162 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 TOMM5Q8N4H5 51 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 OR4F5Q8NH21 305 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 TERB2Q8NHR7 220 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 PRSS22Q9GZN4 317 aa16.74■□□□□ 0.27
NEIL3-202ENST00000513321 RANBP3Q9H6Z4 567 aaPredicted RBP16.74■□□□□ 0.27
NEIL3-202ENST00000513321 CNTFRP26992 372 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 AP3S2P59780 193 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 FOXL1Q12952 345 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 MMDQ15546 238 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 ABCA11PQ4W5N1 156 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 Q6ZS46 218 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 KCTD9Q7L273 389 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 C5orf56Q8N8D9 126 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 FLYWCH2Q96CP2 140 aaKnown RBP16.73■□□□□ 0.27
NEIL3-202ENST00000513321 C16orf95Q9H693 158 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 PRELID3BQ9Y3B1 194 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 COL6A5A8TX70 2615 aa16.73■□□□□ 0.27
NEIL3-202ENST00000513321 SH2D7A6NKC9 451 aaPredicted RBP16.72■□□□□ 0.27
NEIL3-202ENST00000513321 FGF16O43320 207 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 RRASP10301 218 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 RPS16P62249 146 aaKnown RBP16.72■□□□□ 0.27
NEIL3-202ENST00000513321 RTL8BQ17RB0 113 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 Q8N9W7 124 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 TCTEX1D2Q8WW35 142 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 RNF5Q99942 180 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 ZNF702PQ9H963 129 aa16.72■□□□□ 0.27
NEIL3-202ENST00000513321 GPR31O00270 319 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 PEX14O75381 377 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 MDKP21741 143 aaPredicted RBP16.71■□□□□ 0.27
NEIL3-202ENST00000513321 TRIQKQ629K1 86 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 ZNF57Q68EA5 555 aaPredicted RBP16.71■□□□□ 0.27
NEIL3-202ENST00000513321 CMTM1Q8IZ96 169 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 OR51S1Q8NGJ8 323 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 LINC01006Q8NI28 216 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 S100ZQ8WXG8 99 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 RSRP1Q9BUV0 290 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 BEX1Q9HBH7 125 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 HRASLSQ9HDD0 168 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 MCUBQ9NWR8 336 aa16.71■□□□□ 0.27
NEIL3-202ENST00000513321 SIGLEC9Q9Y336 463 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms