RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SOCS1O15524 211 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 SOX15O60248 233 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 FUT3P21217 361 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 ACTBP60709 375 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 C5orf64Q2M2E5 130 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 RAB12Q6IQ22 244 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 LINC00596Q86U02 117 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 FAM89BQ8N5H3 189 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 EDARADDQ8WWZ3 215 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 TM2D1Q9BX74 207 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 RAB9BQ9NP90 201 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 HERC2O95714 4834 aa10.64□□□□□ -0.71
SPCS3-204ENST00000513139 IGHV3-43A0A0B4J1X8 118 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 A0A1W2PN81 502 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 UBE2QL1A1L167 161 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 DPPA5A6NC42 116 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 NBR2O15453 112 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 IGHV3-43DP0DP04 118 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 CHRNA7P36544 502 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 ZNF134P52741 427 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 TMEM50BP56557 158 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 CT45A1Q5HYN5 189 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 ZNF660Q6AZW8 331 aaPredicted RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 C6orf201Q7Z4U5 140 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 HAPLN4Q86UW8 402 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 NPBQ8NG41 125 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 CT45A3Q8NHU0 189 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 NEK7Q8TDX7 302 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 THAP7Q9BT49 309 aaPredicted RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 URM1Q9BTM9 101 aaKnown RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 RSRP1Q9BUV0 290 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 RBM38Q9H0Z9 239 aaKnown RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 RCC2Q9P258 522 aaKnown RBP10.63□□□□□ -0.71
SPCS3-204ENST00000513139 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
SPCS3-204ENST00000513139 KMT2AQ03164 3969 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 FOXI3A8MTJ6 420 aaPredicted RBP10.62□□□□□ -0.71
SPCS3-204ENST00000513139 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 NOL3O60936 208 aaKnown RBP10.62□□□□□ -0.71
SPCS3-204ENST00000513139 PDCD6O75340 191 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 RGS11O94810 467 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 NDUFA3O95167 84 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 RAB6AP20340 208 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 RORCP51449 518 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 TMEM267Q0VDI3 215 aaPredicted RBP10.62□□□□□ -0.71
SPCS3-204ENST00000513139 ECSCRQ19T08 205 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 PLAC9Q5JTB6 97 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
SPCS3-204ENST00000513139 ZNF497Q6ZNH5 498 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 CROCCP3Q8IVE0 287 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 UBALD1Q8TB05 177 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 DDB2Q92466 427 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 RITA1Q96K30 269 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 NEDD4LQ96PU5 975 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 BCL7BQ9BQE9 202 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 SULT4A1Q9BR01 284 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 ATG5Q9H1Y0 275 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 GNG12Q9UBI6 72 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 NUBP2Q9Y5Y2 271 aa10.62□□□□□ -0.71
SPCS3-204ENST00000513139 SPINT2O43291 252 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 MT-ND4P03905 459 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 ZP3P21754 424 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 RANBP1P43487 201 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 OR56B1Q8NGI3 324 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 CCDC107Q8WV48 283 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 PTX4Q96A99 478 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 SLC25A38Q96DW6 304 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 RHOVQ96L33 236 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 SLA2Q9H6Q3 261 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 ABRACLQ9P1F3 81 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 COMMD3Q9UBI1 195 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 RNF150Q9ULK6 438 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 FBXO7Q9Y3I1 522 aa10.61□□□□□ -0.71
SPCS3-204ENST00000513139 A0A075B6Q4 140 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 RAB27BO00194 218 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 IGHV3-11P01762 117 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
SPCS3-204ENST00000513139 CD40LGP29965 261 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 NDPQ00604 133 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 AKIRIN2Q53H80 203 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 LCN12Q6JVE5 192 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 SAMD12Q8N8I0 201 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 OR10R2Q8NGX6 335 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 DYNC2LI1Q8TCX1 351 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 CASTOR1Q8WTX7 329 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 PECRQ9BY49 303 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 RANGRFQ9HD47 186 aaPredicted RBP10.6□□□□□ -0.71
SPCS3-204ENST00000513139 RETNQ9HD89 108 aa10.6□□□□□ -0.71
SPCS3-204ENST00000513139 PLEKHJ1Q9NW61 149 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms