RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HLA-AP01891 365 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 ETV1P50549 477 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 EXOSC2Q13868 293 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 CCDC58Q4VC31 144 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 C6orf201Q7Z4U5 140 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 TMEM61Q8N0U2 210 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 ABRACLQ9P1F3 81 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 KLK5Q9Y337 293 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 LRRC42Q9Y546 428 aa14.17□□□□□ -0.14
HMGCS1-206ENST00000511774 LOC102724200A0A096LPH7 203 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 TRBV5-7A0A0A0MS05 114 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 A0A0B4J203 849 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 PPP5D1E7EU14 171 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 ITGB1BP1O14713 200 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 NAPSAO96009 420 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 LGALS7P47929 136 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 RHOGP84095 191 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 PDPNQ86YL7 162 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 RHOXF1Q8NHV9 184 aa14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 MYCBPQ99417 103 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 MRPS18AQ9NVS2 196 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-206ENST00000511774 SNTNA6NMZ2 147 aa14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 SRRM4A7MD48 611 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 EI24O14681 340 aa14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 OR10K2Q6IF99 312 aa14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 SMIM19Q96E16 107 aa14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 TMEM68Q96MH6 324 aa14.15□□□□□ -0.14
HMGCS1-206ENST00000511774 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 TRBV9A0A0B4J1U6 114 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 DEFB135Q30KP9 77 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 Q499Y3 187 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 ZFP41Q8N8Y5 198 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 PHLDA1Q8WV24 401 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 APH1BQ8WW43 257 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 KCTD12Q96CX2 325 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 PGLYRP3Q96LB9 341 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 HDHD3Q9BSH5 251 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 KCNK15Q9H427 330 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 MLXQ9UH92 298 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 PKD1P98161 4303 aa14.14□□□□□ -0.15
HMGCS1-206ENST00000511774 FCGR1AP12314 374 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 CEACAM6P40199 344 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 SMN1Q16637 294 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 SLC16A13Q7RTY0 426 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 SETD6Q8TBK2 473 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 C5orf30Q96GV9 206 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 NICN1Q9BSH3 213 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 KRTAP4-5Q9BYR2 181 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 FGF20Q9NP95 211 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 SLC35D1Q9NTN3 355 aa14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 TECRQ9NZ01 308 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-206ENST00000511774 SPRY2O43597 315 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 NDUFB8O95169 186 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 OR2C1O95371 312 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 OR9G9P0C7N8 305 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 ATF4P18848 351 aaPredicted RBP14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 HTR2CP28335 458 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 OR52B4Q8NGK2 314 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 PTX4Q96A99 478 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 CKLFQ9UBR5 152 aa14.12□□□□□ -0.15
HMGCS1-206ENST00000511774 A0A0A6YYD4 124 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 TMEM213A2RRL7 107 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 M0R1X1 148 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 SCAF4O95104 1147 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 APOA2P02652 100 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 SCTP09683 121 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 CBLN1P23435 193 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 BMI1P35226 326 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 CAPGP40121 348 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 ATP5G2Q06055 141 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 TM4SF20Q53R12 229 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 C19orf35Q6ZS72 473 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 NEDD4LQ96PU5 975 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 PHB2Q99623 299 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 BABAM2Q9NXR7 383 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 CLEC2DQ9UHP7 191 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 TP53TG1Q9Y2A0 90 aa14.11□□□□□ -0.15
HMGCS1-206ENST00000511774 FAM223BA6NKX1 122 aa14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 DYNC1I1O14576 645 aa14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 FAM223AQ8IWN6 122 aa14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 CDH26Q8IXH8 852 aa14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 HARBI1Q96MB7 349 aa14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 CHMP1AQ9HD42 196 aaPredicted RBP14.1□□□□□ -0.15
HMGCS1-206ENST00000511774 A0A1B0GVY2 172 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 LGALS9O00182 355 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 HLA-DRB3P79483 266 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 ZNF57Q68EA5 555 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 IDO2Q6ZQW0 420 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 Q6ZWC4 215 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 SRSF12Q8WXF0 261 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 DERL3Q96Q80 235 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 ZNF221Q9UK13 617 aa14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 RPL36Q9Y3U8 105 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-206ENST00000511774 TRBV6-6A0A0A6YYG2 114 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 ATP8B1O43520 1251 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 WBP4O75554 376 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 OR2J3O76001 311 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 IGHV3-23P01764 117 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms