RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 OR2D2Q9H210 308 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 OR2W1Q9Y3N9 320 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 J3QRK9 145 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 CRYGBP07316 175 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 PTHLHP12272 177 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 PSMB8P28062 276 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 CDX1P47902 265 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 LGALS7P47929 136 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 VBP1P61758 197 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 TAGLNQ01995 201 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 ZNF562Q6V9R5 426 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 HOGA1Q86XE5 327 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 MINDY2Q8NBR6 621 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 KLK15Q9H2R5 256 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 SLC35D1Q9NTN3 355 aa12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-216ENST00000511767 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 TUSC2O75896 110 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 VDAC1P21796 283 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 SLC6A1P30531 599 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 DUTP33316 252 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 MYCNOSP40205 109 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 THBS3P49746 956 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 PDLIM3Q53GG5 364 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 TMEM177Q53S58 311 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 C19orf54Q5BKX5 351 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 C8orf86Q6ZUL3 223 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 BVESQ8NE79 360 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 BEST4Q8NFU0 473 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 DDB2Q92466 427 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 METTL1Q9UBP6 276 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
PDLIM5-216ENST00000511767 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 LINC00473A8K010 186 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 APOA2P02652 100 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 CD33P20138 364 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 LUMP51884 338 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 NDPQ00604 133 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 CTF1Q16619 201 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 SAMD12Q8N8I0 201 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 LINC00482Q8N8I6 264 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 KCTD12Q96CX2 325 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 P2RX4Q99571 388 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 NAA50Q9GZZ1 169 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
PDLIM5-216ENST00000511767 SPDEFO95238 335 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 PF4P02776 101 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 RRASP10301 218 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 IGLL1P15814 213 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 ALDH3B2P48448 385 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 PLGLAQ15195 96 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 CMTM3Q96MX0 182 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 TNCP24821 2201 aa12.59□□□□□ -0.39
PDLIM5-216ENST00000511767 NUDT19A8MXV4 375 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 SLC25A17O43808 307 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 SOX15O60248 233 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 SLC22A5O76082 557 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 CBX5P45973 191 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 RAB9AP51151 201 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 RPL30P62888 115 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 SSBP2P81877 361 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 TMEM267Q0VDI3 215 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 PJVKQ0ZLH3 352 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 EIF4EBP1Q13541 118 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 MRGPRG-AS1Q2M3A8 158 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 ZNF491Q8N8L2 437 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 COMMD3Q9UBI1 195 aa12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 RBMX2Q9Y388 322 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-216ENST00000511767 TGP01266 2768 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 CCL24O00175 119 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 FCER2P06734 321 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 FCGR2CP31995 323 aa12.57□□□□□ -0.4
PDLIM5-216ENST00000511767 RORCP51449 518 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms