RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 TSPAN5P62079 268 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 MMDQ15546 238 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 RTL8BQ17RB0 113 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 VAX1Q5SQQ9 334 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 DHRS11Q6UWP2 260 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 GLDNQ6ZMI3 551 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-203ENST00000511332 KCTD9Q7L273 389 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 TMEM17Q86X19 198 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF383Q8NA42 475 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 TMEM229BQ8NBD8 167 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 DRAXINQ8NBI3 349 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-203ENST00000511332 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 LINC01006Q8NI28 216 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 SECTM1Q8WVN6 248 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 MOB3AQ96BX8 217 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 C5orf30Q96GV9 206 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 HSD17B10Q99714 261 aaKnown RBP10.25□□□□□ -0.77
COL6A6-203ENST00000511332 SLC5A7Q9GZV3 580 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 BATF3Q9NR55 127 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 LIN7CQ9NUP9 197 aaKnown RBP10.25□□□□□ -0.77
COL6A6-203ENST00000511332 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
COL6A6-203ENST00000511332 V9GYH0 126 aa10.25□□□□□ -0.77
COL6A6-203ENST00000511332 A6NHS1 94 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 NBR2O15453 112 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 IFNA6P05013 189 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 DUTP33316 252 aaKnown RBP10.24□□□□□ -0.77
COL6A6-203ENST00000511332 VDAC2P45880 294 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-203ENST00000511332 ABCA11PQ4W5N1 156 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF660Q6AZW8 331 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-203ENST00000511332 CCDC190Q86UF4 302 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 ARRDC1Q8N5I2 433 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 RNF5Q99942 180 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 SOSTQ9BQB4 213 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 SLC35D1Q9NTN3 355 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 KIAA1456Q9P272 454 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 PRELID3BQ9Y3B1 194 aa10.24□□□□□ -0.77
COL6A6-203ENST00000511332 M0QYG6 137 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 PEX14O75381 377 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 SPDEFO95238 335 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 IGLV2-14P01704 120 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 CD74P04233 296 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 CD3DP04234 171 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 AMY1AP04745 511 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 AMY2AP04746 511 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 ETV6P41212 452 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 BLCAPP62952 87 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 MEF2DQ14814 521 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 PYDC2Q56P42 97 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 C9orf152Q5JTZ5 239 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 FAM71E2Q8N5Q1 922 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 Q8N9W7 124 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 OR6Q1Q8NGQ2 317 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 WFDC12Q8WWY7 111 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 DDB2Q92466 427 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 TSNAXQ99598 290 aaKnown RBP10.23□□□□□ -0.77
COL6A6-203ENST00000511332 FXYD6Q9H0Q3 95 aa10.23□□□□□ -0.77
COL6A6-203ENST00000511332 LINC00473A8K010 186 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 KCNAB3O43448 404 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 NDUFA3O95167 84 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 RAB3DO95716 219 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 IGKV1-16P04430 117 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 AKAIN1P0CW23 69 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 S100GP29377 79 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 PROK1P58294 105 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 CATR1Q13166 79 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 STEAP1BQ6NZ63 245 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 LPCAT3Q6P1A2 487 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 CMTM1Q8IZ96 169 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 Q8N402 240 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 NPBQ8NG41 125 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 TCTEX1D2Q8WW35 142 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 FLYWCH2Q96CP2 140 aaKnown RBP10.22□□□□□ -0.77
COL6A6-203ENST00000511332 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
COL6A6-203ENST00000511332 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 PLSCR3Q9NRY6 295 aa10.22□□□□□ -0.77
COL6A6-203ENST00000511332 F2RL1P55085 397 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 AP3S2P59780 193 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 RPS16P62249 146 aaKnown RBP10.21□□□□□ -0.77
COL6A6-203ENST00000511332 EIF4EBP1Q13541 118 aaPredicted RBP10.21□□□□□ -0.77
COL6A6-203ENST00000511332 PLGLAQ15195 96 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF79Q15937 498 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 TMEM177Q53S58 311 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF818PQ6ZRF7 136 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 SLC38A6Q8IZM9 456 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 KLHDC1Q8N7A1 406 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 BVESQ8NE79 360 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 OR4S2Q8NH73 311 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.77
COL6A6-203ENST00000511332 HARBI1Q96MB7 349 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 SERTAD4Q9NUC0 356 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 SIGLEC9Q9Y336 463 aa10.21□□□□□ -0.77
COL6A6-203ENST00000511332 ANKRD20A5PA0PJZ0 165 aa10.2□□□□□ -0.78
COL6A6-203ENST00000511332 SH2D7A6NKC9 451 aaPredicted RBP10.2□□□□□ -0.78
COL6A6-203ENST00000511332 DISC1C4P0D8 188 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms