RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 ZDHHC22Q8N966 263 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 LINC01356Q8N9X3 169 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 OR13D1Q8NGV5 346 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 GLYATL2Q8WU03 294 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 YAE1D1Q9NRH1 226 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 A0A096LNT2 108 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CENPVL3A0A0U1RRI6 287 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 GPR37O15354 613 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 S1PR2O95136 353 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CT45A6P0DMU7 189 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CT45A5P0DMU8 189 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CT45A7P0DMV0 189 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CNTFRP26992 372 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 Q5BKY6 102 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 HCP5Q6MZN7 132 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 SLC25A48Q6ZT89 311 aaKnown RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 TGIF2LXQ8IUE1 241 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF383Q8NA42 475 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF439Q8NDP4 499 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 OR11H7Q8NGC8 314 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 OR4P4Q8NGL7 312 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF431Q8TF32 576 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 TNFRSF14Q92956 283 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 SCGB3A2Q96PL1 93 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 S1PR3Q99500 378 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 SIRPDQ9H106 197 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 GHITMQ9H3K2 345 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 HEXA-AS1Q9H8Q6 139 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 GPN1Q9HCN4 374 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CRYM-AS1A6NIL9 109 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 BUB1B-PAK6H3BSN5 160 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 CCNKO75909 580 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 SFT2D2O95562 160 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 PRTN3P24158 256 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 F2RP25116 425 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 HTR1DP28221 377 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 PRRX1P54821 245 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 BRWD1-AS2P59051 145 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 SRSF7Q16629 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMAD1-209ENST00000511125 HLA-DRB5Q30154 266 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 FAM120AOSQ5T036 256 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 MAGT1Q9H0U3 335 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 SEBOXQ9HB31 216 aaPredicted RBP6.53□□□□□ -1.36
SMAD1-209ENST00000511125 LPAR3Q9UBY5 353 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 OPN4Q9UHM6 478 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 FN1P02751 2386 aaKnown RBP6.53□□□□□ -1.36
SMAD1-209ENST00000511125 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
SMAD1-209ENST00000511125 MAST4O15021 2626 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 TIMM23O14925 209 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 OR2F2O95006 317 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 MMP9P14780 707 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 S100GP29377 79 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 DUTP33316 252 aaKnown RBP6.53□□□□□ -1.36
SMAD1-209ENST00000511125 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 CCDC71LQ8N9Z2 235 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 DMBX1Q8NFW5 382 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 PHB2Q99623 299 aa6.53□□□□□ -1.36
SMAD1-209ENST00000511125 A0A0G2JRQ6 117 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 A0A0U1RQK1 487 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 BOLA2-SMG1P6H3BVE0 249 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 OR2B8PP59922 312 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 PAX5Q02548 391 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 GPR157Q5UAW9 335 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 LPCAT3Q6P1A2 487 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 OR10C1Q96KK4 312 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 SLC35D1Q9NTN3 355 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 FAM96BQ9Y3D0 163 aa6.52□□□□□ -1.36
SMAD1-209ENST00000511125 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 H2BFSP57053 126 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 S100A10P60903 97 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 RRAS2P62070 204 aaPredicted RBP6.52□□□□□ -1.37
SMAD1-209ENST00000511125 SRSF2Q01130 221 aaKnown RBP6.52□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF585BQ52M93 769 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF626Q68DY1 528 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 SPNS3Q6ZMD2 512 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 MINDY2Q8NBR6 621 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 C8orf46Q8TAG6 207 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 GSX1Q9H4S2 264 aaPredicted RBP6.52□□□□□ -1.37
SMAD1-209ENST00000511125 RAB9BQ9NP90 201 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 PIPOXQ9P0Z9 390 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 PAIP2BQ9ULR5 123 aaKnown RBP6.52□□□□□ -1.37
SMAD1-209ENST00000511125 SHOXO15266 292 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 IGKV1-39P01597 117 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 IGKV1D-39P04432 117 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 RAB7AP51149 207 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 AP2S1P53680 142 aaPredicted RBP6.52□□□□□ -1.37
SMAD1-209ENST00000511125 TMEM187Q14656 261 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 LRRC75A-AS1Q8N1F1 130 aa6.52□□□□□ -1.37
SMAD1-209ENST00000511125 NCBP2LA6PVI3 153 aaKnown RBP6.51□□□□□ -1.37
SMAD1-209ENST00000511125 SRRM4A7MD48 611 aaKnown RBP6.51□□□□□ -1.37
SMAD1-209ENST00000511125 IGLV1-47P01700 117 aa6.51□□□□□ -1.37
SMAD1-209ENST00000511125 PAX1P15863 534 aa6.51□□□□□ -1.37
SMAD1-209ENST00000511125 GNB1P62873 340 aa6.51□□□□□ -1.37
SMAD1-209ENST00000511125 PAX8Q06710 450 aa6.51□□□□□ -1.37
SMAD1-209ENST00000511125 LOXL1Q08397 574 aaPredicted RBP6.51□□□□□ -1.37
SMAD1-209ENST00000511125 PJVKQ0ZLH3 352 aa6.51□□□□□ -1.37
SMAD1-209ENST00000511125 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms