RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
SNF8-206ENST00000509989 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 A0A0A6YYH2 397 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 A6NJ64 397 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 AP4M1O00189 453 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 ARPC1BO15143 372 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 SOX15O60248 233 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 HLA-DRB1P01911 266 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 DUTP33316 252 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 PITPNAQ00169 270 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 EIF4EBP1Q13541 118 aaPredicted RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 RNASE12Q5GAN4 147 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 OR2B11Q5JQS5 317 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 TMEM69Q5SWH9 247 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 LIN54Q6MZP7 749 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 FOXRED2Q8IWF2 684 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 S100A16Q96FQ6 103 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 KLK15Q9H2R5 256 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 OR51J1Q9H342 316 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 PARP11Q9NR21 331 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 CCL28Q9NRJ3 127 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 METTL1Q9UBP6 276 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 ANAPC10Q9UM13 185 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 OR2W1Q9Y3N9 320 aa10.62□□□□□ -0.71
SNF8-206ENST00000509989 RBM7Q9Y580 266 aaKnown RBP10.62□□□□□ -0.71
SNF8-206ENST00000509989 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 SLC25A17O43808 307 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 DIRAS3O95661 229 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 OPN1MWP04001 364 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 CRYGBP07316 175 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 PPIFP30405 207 aaKnown RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 FCGR2CP31995 323 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 MC5RP33032 325 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 RFX2P48378 723 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 RORCP51449 518 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 RPL23AP62750 156 aaKnown RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 CX3CL1P78423 397 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 KIAA0141Q14154 515 aaPredicted RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 C19orf54Q5BKX5 351 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 LYSMD2Q8IV50 215 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 OR4X2Q8NGF9 303 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 MRPS7Q9Y2R9 242 aaKnown RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
SNF8-206ENST00000509989 A3GALT2U3KPV4 340 aa10.61□□□□□ -0.71
SNF8-206ENST00000509989 CTDSP2O14595 271 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 TNFSF12O43508 249 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 WIPF1O43516 503 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 CA2P00918 260 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 PMP2P02689 132 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
SNF8-206ENST00000509989 IGF1P05019 195 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 LUMP51884 338 aaPredicted RBP10.6□□□□□ -0.71
SNF8-206ENST00000509989 DEFA6Q01524 100 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 ECSCRQ19T08 205 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 DEFB136Q30KP8 78 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 PDPNQ86YL7 162 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 SNX29P2Q8IUI4 249 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 ZNF645Q8N7E2 425 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 KCTD12Q96CX2 325 aaKnown RBP10.6□□□□□ -0.71
SNF8-206ENST00000509989 GHITMQ9H3K2 345 aa10.6□□□□□ -0.71
SNF8-206ENST00000509989 RBMX2Q9Y388 322 aaKnown RBP10.6□□□□□ -0.71
SNF8-206ENST00000509989 TMEM127O75204 238 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 CRYZL1O95825 349 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 APOA1P02647 267 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 CTXN2P0C2S0 81 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 OR5H8P0DN80 308 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 ZNF182P17025 639 aaPredicted RBP10.59□□□□□ -0.71
SNF8-206ENST00000509989 THBS3P49746 956 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 FXYD4P59646 89 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 ARPC4P59998 168 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 TAGLNQ01995 201 aaKnown RBP10.59□□□□□ -0.71
SNF8-206ENST00000509989 ZNF660Q6AZW8 331 aaPredicted RBP10.59□□□□□ -0.71
SNF8-206ENST00000509989 IDO2Q6ZQW0 420 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 GPX8Q8TED1 209 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 SECTM1Q8WVN6 248 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
SNF8-206ENST00000509989 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
SNF8-206ENST00000509989 TRAV41A0A0B4J266 112 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 FCGR3BO75015 233 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 RBBP9O75884 186 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 PPYP01298 95 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 IGHG4P01861 327 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 APOA2P02652 100 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 IGLL1P15814 213 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 NAT1P18440 290 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 PSMB8P28062 276 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 CDK10Q15131 360 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 PLGLAQ15195 96 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
SNF8-206ENST00000509989 SAMD5Q5TGI4 173 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms