RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF414Q96IQ9 312 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TWSG1Q9GZX9 223 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ANKRD31Q8N7Z5 1873 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 DICER1Q9UPY3 1922 aaKnown RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 IZUMO1RA6ND01 250 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 M0R1B8 84 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 GNG7O60262 68 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 CXCL1P09341 107 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ADMP35318 185 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 RTP5Q14D33 572 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM196Q5HYL7 178 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 SLC25A47Q6Q0C1 308 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TM4SF19Q96DZ7 209 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 PGLYRP4Q96LB8 373 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 LHX9Q9NQ69 397 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ELOVL5Q9NYP7 299 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 A8MWP6 167 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 H0YIZ8 118 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 H3BUT2 72 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 J3QRE1 110 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF735P0CB33 412 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 UCP1P25874 307 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 PRRX1P54821 245 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 SOX8P57073 446 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 MEF2CQ06413 473 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 GAGE1Q13065 139 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 UNC119Q13432 240 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 RHBDD2Q6NTF9 364 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 SPRED2Q7Z698 418 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 FAM216AQ8WUB2 273 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 MMDQ15546 238 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 MBD3L1Q8WWY6 194 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 GNB1LQ9BYB4 327 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 DEFB127Q9H1M4 99 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 LPAR2Q9HBW0 351 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 F11RQ9Y624 299 aaKnown RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 ITGB1BP1O14713 200 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 UMODP07911 640 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 RIPPLY3P57055 190 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 TIMM23BQ5SRD1 257 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 GFI1BQ5VTD9 330 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF818PQ6ZRF7 136 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 MS4A6AQ9H2W1 248 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 GPR35Q9HC97 309 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 DLL1O00548 723 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 PATE4P0C8F1 98 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 IGFBP3P17936 291 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 CD40P25942 277 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 OR2K2Q8NGT1 345 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF502Q8TBZ5 544 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 C18orf12Q96KH6 178 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 GNRHR2Q96P88 292 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 PKIBQ9C010 78 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 AKIRIN1Q9H9L7 192 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 HRKO00198 91 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ADRA2AP08913 450 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 TFPI2P48307 235 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 TNXAQ16473 311 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 TCF23Q7RTU1 214 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF664Q8N3J9 261 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 RNASEH2CQ8TDP1 164 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 NEUROG3Q9Y4Z2 214 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM56-RWDD3S4R434 201 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 C7orf71A4D174 169 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 PGPA6NDG6 321 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 C17orf51A8MQB3 221 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 CEACAM18A8MTB9 384 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 SCGB1A1P11684 91 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF658BQ4V348 819 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 FHL5Q5TD97 284 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 GATAD1Q8WUU5 269 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 FAM60AQ9NP50 221 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 ARID1AO14497 2285 aa6.29□□□□□ -1.4
UBE2D3-224ENST00000508474 COL18A1P39060 1754 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 PCM1Q15154 2024 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 IGHV5-51A0A0C4DH38 117 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 PEBP1P30086 187 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 TBR1Q16650 682 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 ZXDCQ2QGD7 858 aaPredicted RBP6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 LRTM2Q8N967 370 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 PLPPR1Q8TBJ4 325 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 WNT5BQ9H1J7 359 aa6.28□□□□□ -1.4
UBE2D3-224ENST00000508474 CDK5RAP2Q96SN8 1893 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms