RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 PARD6GQ9BYG4 376 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ATG5Q9H1Y0 275 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 HEXA-AS1Q9H8Q6 139 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ELL3Q9HB65 397 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 BEX1Q9HBH7 125 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SHPKQ9UHJ6 478 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR52A1Q9UKL2 312 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 HDGFL3Q9Y3E1 203 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TNRC6BQ9UPQ9 1833 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TRAV8-7A0A075B6U6 113 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 TVP23AA6NH52 213 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 MCRIP1C9JLW8 97 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 G3V3Q6 166 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 I3L521 148 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 M0QXV9 152 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 MRPS12O15235 138 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 MBTPS2O43462 519 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 ALOX12BO75342 701 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 CLDN1O95832 211 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 IFNA6P05013 189 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SNRPCP09234 159 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR4E1P0C645 316 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 RD3LP0DJH9 198 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 GIMD1P0DJR0 217 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC25A4P12235 298 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 CTLA4P16410 223 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 CD34P28906 385 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 CEACAM3P40198 252 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 RFC3P40938 356 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 KIR3DL2P43630 455 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF133P52736 654 aaPredicted RBP3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 HCCSP53701 268 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 MFAP2P55001 183 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 MLF1P58340 268 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 UBE2KP61086 200 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC35A1P78382 337 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC35B1P78383 322 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 DCDP81605 110 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 ECH1Q13011 328 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 VAX1Q5SQQ9 334 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 GLYATL3Q5SZD4 288 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 OPN5Q6U736 354 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC36A1Q7Z2H8 476 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 PDZD9Q8IXQ8 264 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 BEST4Q8NFU0 473 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR51D1Q8NGF3 324 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR6X1Q8NH79 312 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 COQ8AQ8NI60 647 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 PP6455Q8WZ26 134 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 AQP3Q92482 292 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 TSLPQ969D9 159 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SEH1LQ96EE3 360 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 TBX15Q96SF7 602 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 TTTY10Q9BZA0 68 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 ARL6Q9H0F7 186 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 IFT46Q9NQC8 304 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SIRT7Q9NRC8 400 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 THYN1Q9P016 225 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 RARRES3Q9UL19 164 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 ANAPC10Q9UM13 185 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC22A13Q9Y226 551 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 WIF1Q9Y5W5 379 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 KIAA1549Q9HCM3 1950 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 CUL9Q8IWT3 2517 aa3.39□□□□□ -1.87
CALCOCO2-208ENST00000506971 TRBV6-7A0A0A0MS04 114 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 IGHV3-20A0A0C4DH32 117 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 A0A1W2PR80 420 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR5H14A6NHG9 310 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 A6NIN4 97 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF726A6NNF4 738 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 TMEM14DPA8MWL7 114 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 C9J4A7 227 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 H7C1C5 153 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 SULT2B1O00204 365 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 TAAR5O14804 337 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ARPC5O15511 151 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 BCL2L11O43521 198 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 SGCEO43556 437 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF354AO60765 605 aaPredicted RBP3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 SCRG1O75711 98 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 IGHV2-5P01817 119 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 HLA-AP01891 365 aaKnown RBP3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 CD3DP04234 171 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 SERPINA5P05154 406 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 NMBP08949 121 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ACSM4P0C7M7 580 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 PGA4P0DJD7 388 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 PGA3P0DJD8 388 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF35P13682 527 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF93P35789 620 aaPredicted RBP3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR1D4P47884 311 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 CEBPGP53567 150 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 CLDN12P56749 244 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 TAS2R60P59551 318 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 ERVK-16P61578 105 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 LCN6P62502 163 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 DHRS2Q13268 280 aa3.38□□□□□ -1.87
CALCOCO2-208ENST00000506971 MADCAM1Q13477 382 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms