RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 TXNL4BQ9NX01 149 aaKnown RBP7.57□□□□□ -1.2
NEDD9-210ENST00000505589 RCC2Q9P258 522 aaKnown RBP7.57□□□□□ -1.2
NEDD9-210ENST00000505589 A3GALT2U3KPV4 340 aa7.57□□□□□ -1.2
NEDD9-210ENST00000505589 A0A0B4J203 849 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 H7C2Y5 167 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 SOX15O60248 233 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 SC5DO75845 299 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 LY6G6CO95867 125 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 TGFBR1P36897 503 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 LGALS7P47929 136 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 SERPINB10P48595 397 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 YIF1BQ5BJH7 314 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 C22orf42Q6IC83 251 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 TMEM91Q6ZNR0 172 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 POC5Q8NA72 575 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 OR1L1Q8NH94 360 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 DYNC2LI1Q8TCX1 351 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 RITA1Q96K30 269 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 MRPL20Q9BYC9 149 aaKnown RBP7.56□□□□□ -1.2
NEDD9-210ENST00000505589 FBXL15Q9H469 300 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 RNF167Q9H6Y7 350 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 MBNL3Q9NUK0 354 aaKnown RBP7.56□□□□□ -1.2
NEDD9-210ENST00000505589 PEF1Q9UBV8 284 aaKnown RBP7.56□□□□□ -1.2
NEDD9-210ENST00000505589 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
NEDD9-210ENST00000505589 NUPR2A6NF83 97 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 OR2A4O95047 310 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 SPDEFO95238 335 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 MAS1P04201 325 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 RCC1P18754 421 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 SOX2P48431 317 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 RPS11P62280 158 aaKnown RBP eCLIP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 RPEL1Q2QD12 228 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 LINC00322Q6ZN03 302 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 ODF3L1Q8IXM7 274 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 OR13C5Q8NGS8 318 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 EDARADDQ8WWZ3 215 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 PHYHIPQ92561 330 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 THRSPQ92748 146 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 ST6GALNAC5Q9BVH7 336 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 TAS2R4Q9NYW5 299 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 CCDC59Q9P031 241 aaKnown RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 METTL1Q9UBP6 276 aaKnown RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 GHRLQ9UBU3 117 aa7.55□□□□□ -1.2
NEDD9-210ENST00000505589 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
NEDD9-210ENST00000505589 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 ITGB1BP1O14713 200 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 ARL6IP5O75915 188 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 UCHL1P09936 223 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 EGR2P11161 476 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-210ENST00000505589 ZNF182P17025 639 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-210ENST00000505589 MAPK3P27361 379 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-210ENST00000505589 SYNJ2BPP57105 145 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 CD81P60033 236 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 RPS16P62249 146 aaKnown RBP7.54□□□□□ -1.2
NEDD9-210ENST00000505589 INSL4Q14641 139 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 FXYD3Q14802 87 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 Q499Y3 187 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 ACSM3Q53FZ2 586 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 CEACAM19Q7Z692 300 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 OR52L2PQ8NGH6 319 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 DERL3Q96Q80 235 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 OR14A2Q96R54 314 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 NEURL2Q9BR09 285 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 MGAT4AQ9UM21 535 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 TNCP24821 2201 aa7.54□□□□□ -1.2
NEDD9-210ENST00000505589 SAA2-SAA4A0A096LPE2 208 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 FCN1O00602 326 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 NDUFB8O95169 186 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CSN3P07498 182 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 SAA2P0DJI9 122 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CT45A6P0DMU7 189 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CT45A5P0DMU8 189 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CT45A7P0DMV0 189 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 MYL9P24844 172 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 SDC2P34741 201 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 NDPQ00604 133 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 ANKRD55Q3KP44 614 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 GLT8D1Q68CQ7 371 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 ZNF343Q6P1L6 599 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 GLIPR1L1Q6UWM5 242 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 SLC16A13Q7RTY0 426 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 HAPLN4Q86UW8 402 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 CLCC1Q96S66 551 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 TSC22D3Q99576 134 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 SULT4A1Q9BR01 284 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 SELENOIQ9C0D9 397 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 RIMS4Q9H426 269 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-210ENST00000505589 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms