RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 C11orf54Q9H0W9 315 aaPredicted RBP8.61□□□□□ -1.03
CCHCR1-219ENST00000505392 TRAV8-7A0A075B6U6 113 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 A0A1W2PPK0 400 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 FAM223BA6NKX1 122 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 PPP5D1E7EU14 171 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 TUSC2O75896 110 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 IGLV2-23P01705 113 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 APOA2P02652 100 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 OR9G9P0C7N8 305 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 CAPGP40121 348 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 APOC4P55056 127 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 CCDC58Q4VC31 144 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 FAM223AQ8IWN6 122 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 OR13C5Q8NGS8 318 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 FAM46BQ96A09 425 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 NEDD4LQ96PU5 975 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 SLC35D1Q9NTN3 355 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 CKLFQ9UBR5 152 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 ZNF221Q9UK13 617 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 OAZ3Q9UMX2 235 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 AP4S1Q9Y587 144 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 DMRT1Q9Y5R6 373 aa8.6□□□□□ -1.03
CCHCR1-219ENST00000505392 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 LGALS9O00182 355 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 UBE2CO00762 179 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 MPPED1O15442 326 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 GGCTO75223 188 aaKnown RBP8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 ZBTB25P24278 435 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 ZIK1Q3SY52 487 aaPredicted RBP8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 DNAL1Q4LDG9 190 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 UXS1Q8NBZ7 420 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 OR52I1Q8NGK6 324 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 RNF183Q96D59 192 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 CHMP1AQ9HD42 196 aaPredicted RBP8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 OR1A1Q9P1Q5 309 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 MLXQ9UH92 298 aa8.59□□□□□ -1.03
CCHCR1-219ENST00000505392 TRBV9A0A0B4J1U6 114 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 ZNF320A2RRD8 509 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 SAC3D1A6NKF1 404 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 IFNA4P05014 189 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 LIMS3P0CW19 117 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 LIMS4P0CW20 117 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 ZNF45Q02386 682 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 MRGPRG-AS1Q2M3A8 158 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 C6orf201Q7Z4U5 140 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 SVOPQ8N4V2 548 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 STPG3Q8N7X2 389 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 EXOSC1Q9Y3B2 195 aaKnown RBP8.58□□□□□ -1.04
CCHCR1-219ENST00000505392 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 TRBV5-5A0A0J9YX44 114 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 M0R1X1 148 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 SHOXO15266 292 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 OGG1O15527 345 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 OR2J3O76001 311 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 FCGR1AP12314 374 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 GABRB1P18505 474 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 TNXAQ16473 311 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 Q499Y3 187 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 OR2G6Q5TZ20 316 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 ZNF880Q6PDB4 577 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 RBPMS2Q6ZRY4 209 aaKnown RBP8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 CDH26Q8IXH8 852 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 CCDC197Q8NCU1 140 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 PTX4Q96A99 478 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 SMIM19Q96E16 107 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 CENPNQ96H22 339 aaPredicted RBP8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 Q96MT0 163 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 FBXL17Q9UF56 701 aa8.57□□□□□ -1.04
CCHCR1-219ENST00000505392 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 TMEM213A2RRL7 107 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 XRCC3O43542 346 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 NAPSAO96009 420 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 SCTP09683 121 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 CTRB1P17538 263 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 RPS11P62280 158 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 FAM106AQ4KMX7 169 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 CTRB2Q6GPI1 263 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 OR10K2Q6IF99 312 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 TMPRSS11AQ6ZMR5 421 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 NECAP1Q8NC96 275 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 OR1L6Q8NGR2 347 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 RHOXF1Q8NHV9 184 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 C2CD4CQ8TF44 421 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 SRSF12Q8WXF0 261 aaKnown RBP8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 SLC7A6OSQ96CW6 309 aaPredicted RBP8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 MRPS18AQ9NVS2 196 aaKnown RBP8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 BABAM2Q9NXR7 383 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 UBQLN2Q9UHD9 624 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 RPL36Q9Y3U8 105 aaKnown RBP8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 ORC6Q9Y5N6 252 aa8.56□□□□□ -1.04
CCHCR1-219ENST00000505392 MUC4Q99102 2169 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms