RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC25A33Q9BSK2 321 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 PTTG2Q9NZH5 202 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 ANKRD20A5PA0PJZ0 165 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 H0YJW9 148 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 M0QYG6 137 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 M0QZK8 103 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 TSPAN9O75954 239 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 RAB3DO95716 219 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 IGLV2-14P01704 120 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 IFNA6P05013 189 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 CSF1P09603 554 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 THBS3P49746 956 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 FXYD4P59646 89 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF45Q02386 682 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 HNF4GQ14541 408 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 STEAP1BQ6NZ63 245 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 GLDNQ6ZMI3 551 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 Q8N402 240 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 ARRDC1Q8N5I2 433 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF383Q8NA42 475 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 DRAXINQ8NBI3 349 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 OR8H1Q8NGG4 311 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 SECTM1Q8WVN6 248 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 BORCS5Q969J3 196 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 MOB3AQ96BX8 217 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF2Q9BSG1 426 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 THAP7Q9BT49 309 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 TINAGL1Q9GZM7 467 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 SRRQ9GZT4 340 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 SLC5A7Q9GZV3 580 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 WASHC3Q9Y3C0 194 aa9.5□□□□□ -0.89
PDLIM5-208ENST00000504489 APOA2P02652 100 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 AKAIN1P0CW23 69 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 UCP3P55916 312 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 LINC00205P59089 165 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 FOXL1Q12952 345 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 EIF4EBP1Q13541 118 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 MEF2DQ14814 521 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 Q6ZSV7 163 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 GDPD1Q8N9F7 314 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 OR4F5Q8NH21 305 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 TRIM63Q969Q1 353 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 HSD17B10Q99714 261 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 MDFIQ99750 246 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 RNF5Q99942 180 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 C16orf95Q9H693 158 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 PLSCR3Q9NRY6 295 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 MOB4Q9Y3A3 225 aa9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-208ENST00000504489 LINC00473A8K010 186 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 H7C2Y5 167 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 FGF16O43320 207 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 AMY1AP04745 511 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 AMY2AP04746 511 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 RRASP10301 218 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 GNRHRP30968 328 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 COMPP49747 757 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 RAG2P55895 527 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 AADACL3Q5VUY0 350 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 LPCAT3Q6P1A2 487 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF66Q6ZN08 573 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 LHFPL1Q86WI0 220 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 PDPNQ86YL7 162 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 Q8N2B8 174 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 BVESQ8NE79 360 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 OR4D10Q8NGI6 311 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 OR4C13Q8NGP0 309 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 DDB2Q92466 427 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 PRSS22Q9GZN4 317 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 SLC35D1Q9NTN3 355 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 MMP24Q9Y5R2 645 aa9.48□□□□□ -0.89
PDLIM5-208ENST00000504489 A0A1B0GUS0 222 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF735P0CB33 412 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 F2RL1P55085 397 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 AP3S2P59780 193 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 BLCAPP62952 87 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF818PQ6ZRF7 136 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 KCTD9Q7L273 389 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 Q8N9W7 124 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 NPBQ8NG41 125 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 OR4C16Q8NGL9 310 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 TERB2Q8NHR7 220 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 DEDD2Q8WXF8 326 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 S100ZQ8WXG8 99 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 RITA1Q96K30 269 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms