RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 CFHR4Q92496 578 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 C5orf30Q96GV9 206 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 NABP2Q9BQ15 211 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 FXYD6Q9H0Q3 95 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 MCUBQ9NWR8 336 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 VPREB3Q9UKI3 123 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 GAB2Q9UQC2 676 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 TCF19Q9Y242 345 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 OR5H14A6NHG9 310 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 CLDN34H7C241 214 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 IGKV1D-33P01593 117 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 IGKV1-33P01594 117 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 SNRNP70P08621 437 aaKnown RBP8.04□□□□□ -1.12
NUP54-203ENST00000504173 ZNF735P0CB33 412 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 FAM106CPP0CH98 169 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 IL7P13232 177 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 PGAM2P15259 253 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 THBS3P49746 956 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 PPP5CP53041 499 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 UBA52P62987 128 aaKnown RBP8.04□□□□□ -1.12
NUP54-203ENST00000504173 HES1Q14469 280 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 HABP2Q14520 560 aaPredicted RBP8.04□□□□□ -1.12
NUP54-203ENST00000504173 GLDNQ6ZMI3 551 aaPredicted RBP8.04□□□□□ -1.12
NUP54-203ENST00000504173 DRAXINQ8NBI3 349 aaPredicted RBP8.04□□□□□ -1.12
NUP54-203ENST00000504173 PIFOQ8TCI5 191 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 BORCS5Q969J3 196 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 PRRT1Q99946 306 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 CCDC32Q9BV29 185 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 CHIAQ9BZP6 476 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 HRASLSQ9HDD0 168 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 CCL28Q9NRJ3 127 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 PITPNC1Q9UKF7 332 aa8.04□□□□□ -1.12
NUP54-203ENST00000504173 LINC00854A0A1B0GVQ3 168 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 A6NDX4 124 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 FAM90A9PA6NNJ1 464 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 H0YJW9 148 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 TNFSF12O43508 249 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 PROP1O75360 226 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 APOA2P02652 100 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 RNASE1P07998 156 aaKnown RBP8.03□□□□□ -1.12
NUP54-203ENST00000504173 CT45A6P0DMU7 189 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 CT45A5P0DMU8 189 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 CT45A7P0DMV0 189 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 TMEM11P17152 192 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 CD1BP29016 333 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 CD40LGP29965 261 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 LINC00205P59089 165 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 MSMO1Q15800 293 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 AADACL3Q5VUY0 350 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 LIAT1Q6ZQX7 453 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 TMEM219Q86XT9 240 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 THNSL2Q86YJ6 484 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 ZBTB34Q8NCN2 500 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 OR2T10Q8NGZ9 312 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 DEDD2Q8WXF8 326 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 ADTRPQ96IZ2 230 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 AKR1E2Q96JD6 320 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 SCP2D1Q9UJQ7 156 aa8.03□□□□□ -1.12
NUP54-203ENST00000504173 H7C2Y5 167 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 GPR31O00270 319 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 GPR137BO60478 399 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 MOSP00540 346 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 IGLV2-14P01704 120 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 S100GP29377 79 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 GNRHRP30968 328 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 MC5RP33032 325 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 DUTP33316 252 aaKnown RBP8.02□□□□□ -1.13
NUP54-203ENST00000504173 ECI1P42126 302 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 UCP3P55916 312 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
NUP54-203ENST00000504173 CBX3Q13185 183 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 HNF4GQ14541 408 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 RTL8BQ17RB0 113 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 PHLDA2Q53GA4 152 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 LPCAT3Q6P1A2 487 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 C16orf87Q6PH81 154 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 ZNF818PQ6ZRF7 136 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 KCTD9Q7L273 389 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 SLC38A6Q8IZM9 456 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 ZNF383Q8NA42 475 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 BVESQ8NE79 360 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 OR5AN1Q8NGI8 311 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 OR51S1Q8NGJ8 323 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 TERB2Q8NHR7 220 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
NUP54-203ENST00000504173 HSD17B10Q99714 261 aaKnown RBP8.02□□□□□ -1.13
NUP54-203ENST00000504173 SLC25A33Q9BSK2 321 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 RAB18Q9NP72 206 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 SLC2A8Q9NY64 477 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 WASHC3Q9Y3C0 194 aa8.02□□□□□ -1.13
NUP54-203ENST00000504173 NAP1L6A6NFF2 107 aa8.01□□□□□ -1.13
NUP54-203ENST00000504173 LINC00473A8K010 186 aa8.01□□□□□ -1.13
NUP54-203ENST00000504173 CENPXA8MT69 81 aa8.01□□□□□ -1.13
NUP54-203ENST00000504173 CHST1O43916 411 aa8.01□□□□□ -1.13
NUP54-203ENST00000504173 OR2F2O95006 317 aa8.01□□□□□ -1.13
NUP54-203ENST00000504173 CRYBA1P05813 215 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms