RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PYHIN1Q6K0P9 492 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 UNQ5815/PRO19632Q6UWF5 114 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 ZNF383Q8NA42 475 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
MED28-203ENST00000503945 TOLLIPQ9H0E2 274 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 ATG5Q9H1Y0 275 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 Q9H521 79 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 GNB4Q9HAV0 340 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 M0R1X1 148 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 RAB27BO00194 218 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 DIRAS3O95661 229 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 IGKV1-16P04430 117 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
MED28-203ENST00000503945 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
MED28-203ENST00000503945 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
MED28-203ENST00000503945 LINC00205P59089 165 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 PLA2G7Q13093 441 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 CBX3Q13185 183 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 FHL3Q13643 280 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 FXYD3Q14802 87 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 SRSF7Q16629 238 aaKnown RBP eCLIP9.28□□□□□ -0.92
MED28-203ENST00000503945 MOGAT2Q3SYC2 334 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 IGSF11Q5DX21 431 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 C22orf42Q6IC83 251 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 ZNF429Q86V71 674 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 LFNGQ8NES3 379 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 MS4A10Q96PG2 267 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 GINS4Q9BRT9 223 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 YTHDF1Q9BYJ9 559 aaKnown RBP9.28□□□□□ -0.92
MED28-203ENST00000503945 ZNF355PQ9NSJ1 428 aa9.28□□□□□ -0.92
MED28-203ENST00000503945 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
MED28-203ENST00000503945 TRBV6-7A0A0A0MS04 114 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 LINC01619G3V211 115 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 OVOL1O14753 267 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SPDEFO95238 335 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 HSPB1P04792 205 aaKnown RBP9.27□□□□□ -0.93
MED28-203ENST00000503945 FCGR3AP08637 254 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 RRASP10301 218 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 HIST1H1DP16402 221 aaKnown RBP9.27□□□□□ -0.93
MED28-203ENST00000503945 GABARAPL2P60520 117 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 GNB1P62873 340 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 CDNFQ49AH0 187 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 TPRA1Q86W33 373 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SPARTQ8N0X7 666 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 CASTOR1Q8WTX7 329 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 DCUN1D4Q92564 292 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 FAM103A1Q9BTL3 118 aaKnown RBP9.27□□□□□ -0.93
MED28-203ENST00000503945 ST6GALNAC5Q9BVH7 336 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SLA2Q9H6Q3 261 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SLC35D1Q9NTN3 355 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SDHAF2Q9NX18 166 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 FBXO7Q9Y3I1 522 aa9.27□□□□□ -0.93
MED28-203ENST00000503945 SHISA3A0PJX4 238 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 ARPC1BO15143 372 aaKnown RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 SHOXO15266 292 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 SLC25A17O43808 307 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 SOX15O60248 233 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 ATP6V1G2O95670 118 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 CA2P00918 260 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 CTXN2P0C2S0 81 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 PSMB9P28065 219 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 FGF9P31371 208 aaPredicted RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 RTL8BQ17RB0 113 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 C19orf54Q5BKX5 351 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 UBE2UQ5VVX9 321 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 OR5T1Q8NG75 326 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 FCGR1BQ92637 280 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 DLX4Q92988 240 aaPredicted RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 TMEM68Q96MH6 324 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 PRR25Q96S07 402 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 OR2D2Q9H210 308 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 TXNL4BQ9NX01 149 aaKnown RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 SSR3Q9UNL2 185 aa9.26□□□□□ -0.93
MED28-203ENST00000503945 ZNF256Q9Y2P7 627 aaPredicted RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 LSM4Q9Y4Z0 139 aaKnown RBP9.26□□□□□ -0.93
MED28-203ENST00000503945 A0A0B4J203 849 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 A0A0G2JLM5 398 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 NOTOA8MTQ0 251 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 MFNGO00587 321 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 LY86O95711 162 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 TRGV3P03979 118 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 LGALS1P09382 135 aaKnown RBP9.25□□□□□ -0.93
MED28-203ENST00000503945 TPPP2P59282 170 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 PITPNAQ00169 270 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 NDPQ00604 133 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 Q6ZS49 121 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 BVESQ8NE79 360 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 GRPEL2Q8TAA5 225 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 MAFIPQ8WZ33 124 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 ARPC1AQ92747 370 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 ADTRPQ96IZ2 230 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 RHOVQ96L33 236 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 CABLES2Q9BTV7 478 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 ALX4Q9H161 411 aaPredicted RBP9.25□□□□□ -0.93
MED28-203ENST00000503945 DCSTAMPQ9H295 470 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 STUB1Q9UNE7 303 aa9.25□□□□□ -0.93
MED28-203ENST00000503945 C13orf42A0A1B0GVH6 325 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 SAP30O75446 220 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms