RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PRR18Q8N4B5 295 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 GATAD1Q8WUU5 269 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 KIAA2026Q5HYC2 2103 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 TRGV5A0A0B4J1U4 118 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 PPP5D1E7EU14 171 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 NKX2-8O15522 239 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 ARG2P78540 354 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 PMP22Q01453 160 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 SLC38A11Q08AI6 406 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 SSX2Q16385 188 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 TGIF2LYQ8IUE0 185 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 NANOS1Q8WY41 292 aaKnown RBP13.79□□□□□ -0.2
COL6A1-206ENST00000498614 SLC25A22Q9H936 323 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 APC2O95996 2303 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 DEGS1O15121 323 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 WNT2P09544 360 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 PMS2P11Q13670 270 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-206ENST00000498614 NOL4LQ96MY1 436 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-206ENST00000498614 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 PARLQ9H300 379 aa13.79□□□□□ -0.2
COL6A1-206ENST00000498614 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 J3QT63 122 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 SIRPB1O00241 398 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 ACACAQ13085 2346 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-206ENST00000498614 PRSS8Q16651 343 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 WDR86Q86TI4 376 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 TMEM37Q8WXS4 190 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 PARD6GQ9BYG4 376 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-206ENST00000498614 PKIBQ9C010 78 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 GP6Q9HCN6 339 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 KCNS2Q9ULS6 477 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 A0A1W2PPQ1 181 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-206ENST00000498614 CEACAM6P40199 344 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 TBC1D28Q2M2D7 210 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 TGIF2LXQ8IUE1 241 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 TMEM170AQ8WVE7 144 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 NDUFAF3Q9BU61 184 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 OR2J1Q9GZK6 312 aa13.78□□□□□ -0.2
COL6A1-206ENST00000498614 PRRC2CQ9Y520 2896 aaKnown RBP13.77□□□□□ -0.2
COL6A1-206ENST00000498614 HRASP01112 189 aa13.77□□□□□ -0.21
COL6A1-206ENST00000498614 PSMB3P49720 205 aa13.77□□□□□ -0.21
COL6A1-206ENST00000498614 Q6P435 159 aa13.77□□□□□ -0.21
COL6A1-206ENST00000498614 FUT9Q9Y231 359 aa13.77□□□□□ -0.21
COL6A1-206ENST00000498614 TP53TG5Q9Y2B4 290 aa13.77□□□□□ -0.21
COL6A1-206ENST00000498614 RBM7Q9Y580 266 aaKnown RBP13.77□□□□□ -0.21
COL6A1-206ENST00000498614 PDLIM4P50479 330 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-206ENST00000498614 ZNF124Q15973 351 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 ALKBH6Q3KRA9 238 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 LBHQ53QV2 105 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-206ENST00000498614 GCNT2Q8N0V5 402 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 RTL8AQ9BWD3 113 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 ZZEF1O43149 2961 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 TMEM250H0YL14 139 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 WDR1O75083 606 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 CLDN1O95832 211 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 CD82P27701 267 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 TMEM14EPQ6UXP3 125 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 SCCPDHQ8NBX0 429 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 OR4F5Q8NH21 305 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 ACY3Q96HD9 319 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 OR4F4Q96R69 305 aa13.76□□□□□ -0.21
COL6A1-206ENST00000498614 LRP5LA4QPB2 252 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 NPIPB11E5RHQ5 1161 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 SMPD2O60906 423 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 OR2H2O95918 312 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 GCGP01275 180 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 GYPAP02724 150 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 SELEP16581 610 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 FAM3BP58499 235 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-206ENST00000498614 GNB2P62879 340 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 LURAP1Q96LR2 239 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 LIN7CQ9NUP9 197 aaKnown RBP13.75□□□□□ -0.21
COL6A1-206ENST00000498614 TIMM9Q9Y5J7 89 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 IFNL4K9M1U5 179 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 LYZL6O75951 148 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 OR4A8P0C604 315 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 PPP1CBP62140 327 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 FGFRL1Q8N441 504 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 TRAPPC2LQ9UL33 140 aa13.75□□□□□ -0.21
COL6A1-206ENST00000498614 CDIPTO14735 213 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 EREGO14944 169 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 SPCS3P61009 180 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 DRAM1Q8N682 238 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 BEND2Q8NDZ0 799 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 OR2T10Q8NGZ9 312 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 NCOR2Q9Y618 2525 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 CTXND1A0A1B0GTU2 59 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 IGHV1-2P23083 117 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 UBE2NP61088 152 aaKnown RBP13.74□□□□□ -0.21
COL6A1-206ENST00000498614 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
COL6A1-206ENST00000498614 TNFRSF9Q07011 255 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 IGF2-ASQ6U949 168 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms