RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 FGL1Q08830 312 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 HFEQ30201 348 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SPRNQ5BIV9 151 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 GSG1LQ6UXU4 331 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF788Q6ZQV5 615 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 DEFB108BQ8NET1 73 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 OR10V1Q8NGI7 309 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CASTOR1Q8WTX7 329 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RTN4IP1Q8WWV3 396 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CCL17Q92583 94 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 ARL11Q969Q4 196 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RAX2Q96IS3 184 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 AKR1E2Q96JD6 320 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2A7Q96R45 310 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 PDCD10Q9BUL8 212 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SUCNR1Q9BXA5 334 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CHIAQ9BZP6 476 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SLC5A7Q9GZV3 580 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SHARPINQ9H0F6 387 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 FXYD6Q9H0Q3 95 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 METTL8Q9H825 291 aaKnown RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 ZMAT4Q9H898 229 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CBLN4Q9NTU7 201 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 OR6C3Q9NZP0 311 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 COMMD9Q9P000 198 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RBM7Q9Y580 266 aaKnown RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 HIVEP2P31629 2446 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TLN2Q9Y4G6 2542 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TRGV10A0A0A0MS01 117 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 IGKV1-6A0A0C4DH72 117 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 ODAMA1E959 279 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 C5orf51A6NDU8 294 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 C12orf77C9JDV5 145 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TRIM77I1YAP6 450 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 NDUFB3O43676 98 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 B3GALNT1O75752 331 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 FSTL3O95633 263 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 HBZP02008 142 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 GYPAP02724 150 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 NUP62P37198 522 aaPredicted RBP4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 GLIPR1P48060 266 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 EDDM3BP56851 147 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 SRPXP78539 464 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 HTD2P86397 168 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 CD69Q07108 199 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 EXOSC2Q13868 293 aaKnown RBP4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 EDDM3AQ14507 147 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 HERPUD1Q15011 391 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 SLC9A3R2Q15599 337 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM30BQ3MIR4 351 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 STUMQ69YW2 141 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM65Q6PI78 240 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 H1FOOQ8IZA3 346 aaPredicted RBP4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 LGI3Q8N145 548 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 ZCCHC24Q8N2G6 241 aaKnown RBP4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 PRR18Q8N4B5 295 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 EIF4E3Q8N5X7 224 aaKnown RBP4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 ZBTB34Q8NCN2 500 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNRF1Q8ND25 227 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 OR5M8Q8NGP6 311 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2T35Q8NGX2 323 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 MRGPRDQ8TDS7 321 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM216AQ8WUB2 273 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 SECTM1Q8WVN6 248 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM230Q96A57 120 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 GALNT14Q96FL9 552 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 COQ2Q96H96 371 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 Q96MF0 132 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 GAFA1Q96PS6 74 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 CCL13Q99616 98 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 TOLLIPQ9H0E2 274 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 KLK15Q9H2R5 256 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 NAA60Q9H7X0 242 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 SLC2A9Q9NRM0 540 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 RDH8Q9NYR8 311 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 LPAR3Q9UBY5 353 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 HCFC1P51610 2035 aa4.37□□□□□ -1.71
HMGXB4-208ENST00000498325 DYSFO75923 2080 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 TRAV39A0A0B4J263 110 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 C3orf85A0A1B0GTC6 90 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 C13orf42A0A1B0GVH6 325 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 DUXBA0A1W2PPF3 345 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 hADV38S2A0JD32 116 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF729A6NN14 1252 aaPredicted RBP4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 HMSDA8MTL9 139 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM25EA8MYX2 175 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 SMLR1H3BR10 107 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 TOR1AO14656 332 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 HSD17B6O14756 317 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 MPPED1O15442 326 aa4.36□□□□□ -1.71
HMGXB4-208ENST00000498325 ADAM20O43506 726 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms