RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 NCBP2LA6PVI3 153 aaKnown RBP12.76□□□□□ -0.37
SSBP1-214ENST00000498107 PROP1O75360 226 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 IGKV1-13P0DP09 117 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 ETV6P41212 452 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 FXYD4P59646 89 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 AWAT1Q58HT5 328 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-214ENST00000498107 LPCAT3Q6P1A2 487 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 GLDNQ6ZMI3 551 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-214ENST00000498107 PDPNQ86YL7 162 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 ARRDC1Q8N5I2 433 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 HSD17B10Q99714 261 aaKnown RBP12.76□□□□□ -0.37
SSBP1-214ENST00000498107 SLC5A7Q9GZV3 580 aa12.76□□□□□ -0.37
SSBP1-214ENST00000498107 CD3DP04234 171 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 DUTP33316 252 aaKnown RBP12.75□□□□□ -0.37
SSBP1-214ENST00000498107 MEF2DQ14814 521 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 MMDQ15546 238 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF66Q6ZN08 573 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 Q8N2B8 174 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 DRAXINQ8NBI3 349 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-214ENST00000498107 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 RASL11BQ9BPW5 248 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 SLC35D1Q9NTN3 355 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 KIAA1456Q9P272 454 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 PRELID3BQ9Y3B1 194 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 V9GYH0 126 aa12.75□□□□□ -0.37
SSBP1-214ENST00000498107 RAB3DO95716 219 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 CD74P04233 296 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 MDKP21741 143 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-214ENST00000498107 S100GP29377 79 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 STEAP1BQ6NZ63 245 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 LINC00299Q6ZSB3 139 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 Q8N402 240 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
SSBP1-214ENST00000498107 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
SSBP1-214ENST00000498107 THAP7Q9BT49 309 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
SSBP1-214ENST00000498107 RNF114Q9Y508 228 aa12.74□□□□□ -0.37
SSBP1-214ENST00000498107 M0QYG6 137 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 NBR2O15453 112 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 PEX14O75381 377 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 AKAIN1P0CW23 69 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 LGALS7P47929 136 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 AP3S2P59780 193 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 BLCAPP62952 87 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 CATR1Q13166 79 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 NPBQ8NG41 125 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
SSBP1-214ENST00000498107 TINAGL1Q9GZM7 467 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-214ENST00000498107 DISC1C4P0D8 188 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 SPDEFO95238 335 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 VDAC2P45880 294 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-214ENST00000498107 UCP3P55916 312 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 RPS16P62249 146 aaKnown RBP12.72□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF45Q02386 682 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 C9orf152Q5JTZ5 239 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 C3orf56Q8N813 242 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 GDPD1Q8N9F7 314 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 DEDD2Q8WXF8 326 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
SSBP1-214ENST00000498107 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
SSBP1-214ENST00000498107 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 LINC00473A8K010 186 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 GPR31O00270 319 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 KCNAB3O43448 404 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 NDUFA3O95167 84 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 AMY1AP04745 511 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 AMY2AP04746 511 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 GNRHRP30968 328 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 FAUP35544 74 aaKnown RBP12.71□□□□□ -0.37
SSBP1-214ENST00000498107 ECI1P42126 302 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 F2RL1P55085 397 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF79Q15937 498 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 TMEM177Q53S58 311 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 ZNF818PQ6ZRF7 136 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 SLC38A6Q8IZM9 456 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 MFSD4AQ8N468 514 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 FAM71E2Q8N5Q1 922 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 Q8N9W7 124 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 POC5Q8NA72 575 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 BVESQ8NE79 360 aa12.71□□□□□ -0.37
SSBP1-214ENST00000498107 OSR1Q8TAX0 266 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-214ENST00000498107 DDB2Q92466 427 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms