RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 ANK3Q12955 4377 aaKnown RBP19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 ABCA1O95477 2261 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 CSPG4Q6UVK1 2322 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 GATA3P23771 443 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 RUSC1-AS1Q66K80 236 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 CYB5R2Q6BCY4 276 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 ZNF66Q6ZN08 573 aa19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 HSD17B10Q99714 261 aaKnown RBP19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 SOX21Q9Y651 276 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF4-203ENST00000497869 H0Y980 276 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 CREBL2O60519 120 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 IGKV1-39P01597 117 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 IGKV1D-39P04432 117 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 KCTD9Q7L273 389 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 TCTEX1D2Q8WW35 142 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 S1PR3Q99500 378 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 TMEM222Q9H0R3 208 aa19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 GPN1Q9HCN4 374 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF4-203ENST00000497869 TRAV40A0A0B4J280 105 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 UCP1P25874 307 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 HTR1DP28221 377 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 FCN2Q15485 313 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 TPTE2P1Q5T6R2 138 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 NABP2Q9BQ15 211 aa19.6■□□□□ 0.73
TNFRSF4-203ENST00000497869 BCAP31P51572 246 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 C12orf45Q8N5I9 185 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 DPM3Q9P2X0 92 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 ACANP16112 2415 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 DBX1A6NMT0 343 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 CXCL3P19876 107 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 LIAT1Q6ZQX7 453 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 UXS1Q8NBZ7 420 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 OR11H7Q8NGC8 314 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 CHAC2Q8WUX2 184 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 KCNIP3Q9Y2W7 256 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 HILPDAQ9Y5L2 63 aa19.59■□□□□ 0.73
TNFRSF4-203ENST00000497869 SETXQ7Z333 2677 aaKnown RBP19.58■□□□□ 0.73
TNFRSF4-203ENST00000497869 IGHV1-69DA0A0B4J2H0 117 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 A0A1W2PPI3 338 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 IGHV1-69P01742 117 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 SAA4P35542 130 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 FAM71F2Q6NXP2 309 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 BRD3OSQ6XYD6 125 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 SPAG16Q8N0X2 631 aa19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 WDR89Q96FK6 387 aaPredicted RBP19.58■□□□□ 0.72
TNFRSF4-203ENST00000497869 J3QLI3 93 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 NPFFO15130 113 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 SSNA1O43805 119 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 ADAP1O75689 374 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 CDS2O95674 445 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 S100GP29377 79 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 RRAS2P62070 204 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 TGIF2LXQ8IUE1 241 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 TMEM56Q96MV1 263 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 AMMECR1Q9Y4X0 333 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 TMEM56-RWDD3S4R434 201 aa19.57■□□□□ 0.72
TNFRSF4-203ENST00000497869 IGHV3-72A0A0B4J1Y9 119 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 MPTX1A8MV57 137 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 LEUTXA8MZ59 168 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 H0YJW9 148 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 FCGR3BO75015 233 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 IL3RAP26951 378 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 THBS3P49746 956 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 ZNF816Q0VGE8 651 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 FBLN7Q53RD9 439 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 SELENOHQ8IZQ5 122 aaKnown RBP19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 OR5AN1Q8NGI8 311 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 C18orf12Q96KH6 178 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 LIN7CQ9NUP9 197 aaKnown RBP19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 IGHV1-3A0A0C4DH29 117 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 CCSO14618 274 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 IGKV1-16P04430 117 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 SULT1A3P0DMM9 295 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 SULT1A4P0DMN0 295 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 CATR1Q13166 79 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 SSX2Q16385 188 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 LYZL2Q7Z4W2 148 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 LRTM2Q8N967 370 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 RPEQ96AT9 228 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 PHB2Q99623 299 aa19.56■□□□□ 0.72
TNFRSF4-203ENST00000497869 A0A0B4J2A0 478 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 RNF212BA8MTL3 300 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 S1PR2O95136 353 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 LPAR6P43657 344 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 MINOS1Q5TGZ0 78 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 SHPKQ9UHJ6 478 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 MINOS1-NBL1R4GNA1 71 aa19.55■□□□□ 0.72
TNFRSF4-203ENST00000497869 SIX6O95475 246 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 FSHBP01225 129 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 GAPDHP04406 335 aaKnown RBP19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 ANXA3P12429 323 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 CD300CQ08708 224 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 TMEM268Q5VZI3 342 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 SLC35G3Q8N808 338 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 CFHR4Q92496 578 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 RITA1Q96K30 269 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 MED28Q9H204 178 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 A0A0G2JRQ6 117 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 HMX3A6NHT5 357 aa19.54■□□□□ 0.72
TNFRSF4-203ENST00000497869 MIDNQ504T8 468 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms