RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 HAGHQ16775 308 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
COL4A2-209ENST00000494852 PYHIN1Q6K0P9 492 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 Q9N2K0 584 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 MGAT4AQ9UM21 535 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 SSR3Q9UNL2 185 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
COL4A2-209ENST00000494852 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
COL4A2-209ENST00000494852 A0A0B4J203 849 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 ECSCRQ19T08 205 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 MOGAT2Q3SYC2 334 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 TPRA1Q86W33 373 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 ANKRD13BQ86YJ7 626 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 OR2AK2Q8NG84 335 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 PTX4Q96A99 478 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 RAB3CQ96E17 227 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
COL4A2-209ENST00000494852 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
COL4A2-209ENST00000494852 NOTOA8MTQ0 251 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 RAB27BO00194 218 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 HLA-DRB3P79483 266 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 NDPQ00604 133 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 TMEM267Q0VDI3 215 aaPredicted RBP12.15□□□□□ -0.46
COL4A2-209ENST00000494852 NEDD8Q15843 81 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 HAPLN4Q86UW8 402 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 CASTOR1Q8WTX7 329 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 RHOVQ96L33 236 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 MRPL20Q9BYC9 149 aaKnown RBP12.15□□□□□ -0.46
COL4A2-209ENST00000494852 IFI27L2Q9H2X8 130 aa12.15□□□□□ -0.46
COL4A2-209ENST00000494852 SMIM30A4D0T7 59 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 ITGB1BP1O14713 200 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 IGHV3-11P01762 117 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 SCTP09683 121 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
COL4A2-209ENST00000494852 ZBTB25P24278 435 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 CX3CL1P78423 397 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
COL4A2-209ENST00000494852 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 METTL21EPA6NDL7 271 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 TRDCB7Z8K6 153 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 MFNGO00587 321 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 CD3GP09693 182 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 SAA2P0DJI9 122 aaPredicted RBP12.13□□□□□ -0.47
COL4A2-209ENST00000494852 HIST1H1DP16402 221 aaKnown RBP12.13□□□□□ -0.47
COL4A2-209ENST00000494852 GNB3P16520 340 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 CD36P16671 472 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 GADD45AP24522 165 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 CEACAM6P40199 344 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 OR3A3P47888 321 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 FAM71F2Q6NXP2 309 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 AGMATQ9BSE5 352 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 PARP12Q9H0J9 701 aaKnown RBP12.13□□□□□ -0.47
COL4A2-209ENST00000494852 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 OR1A1Q9P1Q5 309 aa12.13□□□□□ -0.47
COL4A2-209ENST00000494852 IGKV1-6A0A0C4DH72 117 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 H0Y980 276 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 RAB29O14966 203 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 CD40LGP29965 261 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 SDC2P34741 201 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 MRPS15P82914 257 aaKnown RBP12.12□□□□□ -0.47
COL4A2-209ENST00000494852 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 SFXN4Q6P4A7 337 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 C11orf54Q9H0W9 315 aaPredicted RBP12.12□□□□□ -0.47
COL4A2-209ENST00000494852 ATG5Q9H1Y0 275 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 RNF167Q9H6Y7 350 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 DAPK2Q9UIK4 370 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
COL4A2-209ENST00000494852 ALMS1Q8TCU4 4167 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 RRHO14718 337 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 FCGR3AP08637 254 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 ZP3P21754 424 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 TPPP2P59282 170 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 OR4A4PQ8NGN8 299 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 THAP7Q9BT49 309 aaPredicted RBP12.11□□□□□ -0.47
COL4A2-209ENST00000494852 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
COL4A2-209ENST00000494852 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
COL4A2-209ENST00000494852 A0A075B6Q4 140 aa12.1□□□□□ -0.47
COL4A2-209ENST00000494852 A0A087WXM4 84 aa12.1□□□□□ -0.47
COL4A2-209ENST00000494852 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
COL4A2-209ENST00000494852 FCN1O00602 326 aa12.1□□□□□ -0.47
COL4A2-209ENST00000494852 FABP7O15540 132 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms