RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TRDCB7Z8K6 153 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 LYL1P12980 280 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 RAB11BQ15907 218 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 TMEM91Q6ZNR0 172 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 ANKRD13BQ86YJ7 626 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 OR56B1Q8NGI3 324 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 CITED4Q96RK1 184 aa17.82■□□□□ 0.44
COL27A1-208ENST00000494780 AK6Q9Y3D8 172 aaKnown RBP17.82■□□□□ 0.44
COL27A1-208ENST00000494780 A0A0G2JLM5 398 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 LDLRAD4O15165 306 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 ARL6IP5O75915 188 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 RANBP1P43487 201 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 LGALS7P47929 136 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 SERPINB10P48595 397 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 TPBGQ13641 420 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 TRAM1Q15629 374 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 MOGAT2Q3SYC2 334 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 HAPLN4Q86UW8 402 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 Q8N1Y9 231 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 OR4A4PQ8NGN8 299 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 TMEM68Q96MH6 324 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 TM2D3Q9BRN9 247 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 SLC35D1Q9NTN3 355 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 DNAH7Q8WXX0 4024 aa17.81■□□□□ 0.44
COL27A1-208ENST00000494780 A8MZ25 164 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 M0R1X1 148 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 CNIH1O95406 144 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 IGHV4-30-4P0DP06 118 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 PSMA1P25786 263 aaKnown RBP17.8■□□□□ 0.44
COL27A1-208ENST00000494780 PLAC9Q5JTB6 97 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 OR5T1Q8NG75 326 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 RSRP1Q9BUV0 290 aa17.8■□□□□ 0.44
COL27A1-208ENST00000494780 BRI3O95415 125 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 IGLV2-23P01705 113 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 RPS25P62851 125 aaKnown RBP17.79■□□□□ 0.44
COL27A1-208ENST00000494780 SSBP2P81877 361 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-208ENST00000494780 SGPP2Q8IWX5 399 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 FAM3DQ96BQ1 224 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 PALMDQ9NP74 551 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 C19orf73Q9NVV2 129 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 TPRKBQ9Y3C4 175 aa17.79■□□□□ 0.44
COL27A1-208ENST00000494780 DENRO43583 198 aaKnown RBP17.78■□□□□ 0.44
COL27A1-208ENST00000494780 CRYGBP07316 175 aa17.78■□□□□ 0.44
COL27A1-208ENST00000494780 HSMCR30P0CW71 290 aa17.78■□□□□ 0.44
COL27A1-208ENST00000494780 CLDN12P56749 244 aa17.78■□□□□ 0.44
COL27A1-208ENST00000494780 KLF5Q13887 457 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-208ENST00000494780 C2orf76Q3KRA6 126 aa17.78■□□□□ 0.44
COL27A1-208ENST00000494780 ANKRD34BA5PLL1 514 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 FABP7O15540 132 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 MRPS15P82914 257 aaKnown RBP17.77■□□□□ 0.44
COL27A1-208ENST00000494780 TAGLNQ01995 201 aaKnown RBP17.77■□□□□ 0.44
COL27A1-208ENST00000494780 PJVKQ0ZLH3 352 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 CABLES2Q9BTV7 478 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 OR2D2Q9H210 308 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 V9GY05 133 aa17.77■□□□□ 0.44
COL27A1-208ENST00000494780 DYNC2H1Q8NCM8 4307 aaKnown RBP17.76■□□□□ 0.43
COL27A1-208ENST00000494780 DIRAS3O95661 229 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 CD3GP09693 182 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 AADACP22760 399 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 CALRP27797 417 aaKnown RBP17.76■□□□□ 0.43
COL27A1-208ENST00000494780 PSMD7P51665 324 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 MLLT11Q13015 90 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-208ENST00000494780 CBX3Q13185 183 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 OR9G4Q8NGQ1 327 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 HARBI1Q96MB7 349 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 TINAGL1Q9GZM7 467 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-208ENST00000494780 DUSP21Q9H596 190 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 SDHAF2Q9NX18 166 aa17.76■□□□□ 0.43
COL27A1-208ENST00000494780 TENM2Q9NT68 2774 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 H0Y980 276 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 BET1O15155 118 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 TMEM177Q53S58 311 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 OR10J5Q8NHC4 309 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 RAB3CQ96E17 227 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 RAB22AQ9UL26 194 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 KCNK7Q9Y2U2 307 aa17.75■□□□□ 0.43
COL27A1-208ENST00000494780 TRBV6-7A0A0A0MS04 114 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 TMEM272A0A1B0GTI8 110 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 RGS10O43665 173 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 FCGR3AP08637 254 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 RTL8BQ17RB0 113 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 IGSF11Q5DX21 431 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 ZNF343Q6P1L6 599 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 IL34Q6ZMJ4 242 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 USMG5Q96IX5 58 aa17.74■□□□□ 0.43
COL27A1-208ENST00000494780 PEF1Q9UBV8 284 aaKnown RBP17.74■□□□□ 0.43
COL27A1-208ENST00000494780 ERICH4A6NGS2 130 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 SHOXO15266 292 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 GSTT2P0CG29 244 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 GSTT2BP0CG30 244 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 RRASP10301 218 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 SYNJ2BPP57105 145 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 FABP5Q01469 135 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 TATDN3Q17R31 274 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 BVESQ8NE79 360 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 ISOC1Q96CN7 298 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 EDA2RQ9HAV5 297 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 ACOT13Q9NPJ3 140 aa17.73■□□□□ 0.43
COL27A1-208ENST00000494780 SRRM4A7MD48 611 aaKnown RBP17.72■□□□□ 0.43
COL27A1-208ENST00000494780 PLA2G7Q13093 441 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms