RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 MINOS1Q5TGZ0 78 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 LHFPL4Q7Z7J7 247 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 TGIF2LXQ8IUE1 241 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 TCTEX1D1Q8N7M0 179 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 DRAXINQ8NBI3 349 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-231ENST00000494043 MITD1Q8WV92 249 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 DDB2Q92466 427 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 RPEQ96AT9 228 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 TMEM222Q9H0R3 208 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 TBL2Q9Y4P3 447 aaKnown RBP9.24□□□□□ -0.93
MCF2L-231ENST00000494043 MINOS1-NBL1R4GNA1 71 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 CELSR1Q9NYQ6 3014 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 NPFFO15130 113 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 TXNL1O43396 289 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 SSNA1O43805 119 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 CT45A6P0DMU7 189 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 CT45A5P0DMU8 189 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 CT45A7P0DMV0 189 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 IGHV4-38-2P0DP08 117 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 UCP1P25874 307 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 SAA4P35542 130 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 KIR2DS2P43631 304 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 LGALS4P56470 323 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 SRPXP78539 464 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 KRTAP1-1Q07627 177 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF816Q0VGE8 651 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-231ENST00000494043 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 GPR157Q5UAW9 335 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 CADM3Q8N126 398 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 C12orf45Q8N5I9 185 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF383Q8NA42 475 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 COQ8AQ8NI60 647 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 GLYATL2Q8WU03 294 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 PHB2Q99623 299 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 NABP2Q9BQ15 211 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 FAM212BQ9NTI7 297 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-231ENST00000494043 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 SHPKQ9UHJ6 478 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 PRELID3BQ9Y3B1 194 aa9.23□□□□□ -0.93
MCF2L-231ENST00000494043 IGHV3OR16-10A0A075B7F0 116 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 IGHV1-3A0A0C4DH29 117 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 A0A1W2PPI3 338 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 OOSP1A8MZH6 123 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 RBFOX2O43251 390 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■■□□□ 12.5
MCF2L-231ENST00000494043 CD5LO43866 347 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 GAPDHP04406 335 aaKnown RBP9.22□□□□□ -0.93
MCF2L-231ENST00000494043 SERPINE2P07093 398 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 EPHA1P21709 976 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 BRWD1-AS2P59051 145 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
MCF2L-231ENST00000494043 RUSC1-AS1Q66K80 236 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 LIN54Q6MZP7 749 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 SPAG16Q8N0X2 631 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 LGI3Q8N145 548 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 OR8H3Q8N146 312 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 LHFPL5Q8TAF8 219 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 CD300LFQ8TDQ1 290 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 AJUBAQ96IF1 538 aa9.22□□□□□ -0.93
MCF2L-231ENST00000494043 A8MV72 311 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-231ENST00000494043 H0YJW9 148 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 RAMP3O60896 148 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 FCGR3BO75015 233 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 CDS2O95674 445 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 FSHBP01225 129 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 APOA2P02652 100 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 RPA2P15927 270 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 BCAP31P51572 246 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 RRAS2P62070 204 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-231ENST00000494043 TAGLNQ01995 201 aaKnown RBP9.21□□□□□ -0.94
MCF2L-231ENST00000494043 RTL8BQ17RB0 113 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 CCDC144NLQ6NUI1 221 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 SPNS3Q6ZMD2 512 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 LRTM2Q8N967 370 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 UXS1Q8NBZ7 420 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 OR5AN1Q8NGI8 311 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 OR4S2Q8NH73 311 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 C17orf50Q8WW18 174 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 IL22RA2Q969J5 263 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 MALSU1Q96EH3 234 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 C18orf12Q96KH6 178 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 TMEM56Q96MV1 263 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 MED28Q9H204 178 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 SLC35D1Q9NTN3 355 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 HILPDAQ9Y5L2 63 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 TMEM56-RWDD3S4R434 201 aa9.21□□□□□ -0.94
MCF2L-231ENST00000494043 ABCA1O95477 2261 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 S1PR2O95136 353 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 RRASP10301 218 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 LPAR6P43657 344 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 RAB13P51153 203 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 FCN2Q15485 313 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms