RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CENPFP49454 3210 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 METTL15A6NJ78 407 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 LTAP01374 205 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 CTSEP14091 401 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 GADD45AP24522 165 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 C1DQ13901 141 aaKnown RBP3.33□□□□□ -1.88
SMC2-205ENST00000493955 IGFBP7Q16270 282 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 BCL2A1Q16548 175 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 ZNF660Q6AZW8 331 aaPredicted RBP3.33□□□□□ -1.88
SMC2-205ENST00000493955 DNM1P34Q6PK57 102 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMC2-205ENST00000493955 OTUB2Q96DC9 234 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 TRIB3Q96RU7 358 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 B9D2Q9BPU9 175 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 ALX4Q9H161 411 aaPredicted RBP3.33□□□□□ -1.88
SMC2-205ENST00000493955 DDX60LQ5H9U9 1706 aaKnown RBP3.33□□□□□ -1.88
SMC2-205ENST00000493955 COL1A1P02452 1464 aaPredicted RBP3.33□□□□□ -1.88
SMC2-205ENST00000493955 CLUHO75153 1309 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 DOCK1Q14185 1865 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 A0A0B4J2C4 111 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 H3BMM0 161 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 M0QYV0 167 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 ZW10O43264 779 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 NIPSNAP2O75323 286 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 IGHV3-53P01767 116 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 GUSBP08236 651 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 CD99P14209 185 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 PRPS1L1P21108 318 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 COILP38432 576 aaPredicted RBP3.32□□□□□ -1.88
SMC2-205ENST00000493955 SULT1A2P50226 295 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 HES3Q5TGS1 186 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 Q6ZQT7 251 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 ZBTB8OSQ8IWT0 167 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 C2orf73Q8N5S3 287 aaPredicted RBP3.32□□□□□ -1.88
SMC2-205ENST00000493955 BPIFB6Q8NFQ5 453 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 ZNRF2Q8NHG8 242 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 UBE2WQ96B02 151 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 GALMQ96C23 342 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 PPCDCQ96CD2 204 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 UBQLN4Q9NRR5 601 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 GLS2Q9UI32 602 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 ZNF230Q9UIE0 474 aaPredicted RBP3.32□□□□□ -1.88
SMC2-205ENST00000493955 SIPA1L1O43166 1804 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 CDK5RAP2Q96SN8 1893 aa3.32□□□□□ -1.88
SMC2-205ENST00000493955 A6NED7 52 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 STX10O60499 249 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 ARL6IP5O75915 188 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 UGT2B7P16662 529 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 CFL1P23528 166 aaKnown RBP3.31□□□□□ -1.88
SMC2-205ENST00000493955 MGAT3Q09327 533 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 LYPD1Q8N2G4 141 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 SMIM19Q96E16 107 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 NSRP1Q9H0G5 558 aaKnown RBP3.31□□□□□ -1.88
SMC2-205ENST00000493955 MAST2Q6P0Q8 1798 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 LTBP2Q14767 1821 aa3.31□□□□□ -1.88
SMC2-205ENST00000493955 TRIOBPQ9H2D6 2365 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 MYO5AQ9Y4I1 1855 aaKnown RBP3.3□□□□□ -1.88
SMC2-205ENST00000493955 LOC285556D6RIA3 1793 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 IGHV3OR15-7A0A075B7D8 119 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 TINCRA0A1B0GVN0 87 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 B4DEV8 164 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 GYPCP04921 128 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 PSMA1P25786 263 aaKnown RBP3.3□□□□□ -1.88
SMC2-205ENST00000493955 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
SMC2-205ENST00000493955 GABARAPL2P60520 117 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 SMAGPQ0VAQ4 97 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 LGALSLQ3ZCW2 172 aaPredicted RBP3.3□□□□□ -1.88
SMC2-205ENST00000493955 SLC36A2Q495M3 483 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 NIT1Q86X76 327 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 DOLPP1Q86YN1 238 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 TMEM156Q8N614 296 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 TNFAIP8L1Q8WVP5 186 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 SLC22A4Q9H015 551 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 PRO3102Q9H379 93 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 KCNIP2Q9NS61 270 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 FAM206AQ9NX38 181 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 USE1Q9NZ43 259 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 MYH2Q9UKX2 1941 aa3.3□□□□□ -1.88
SMC2-205ENST00000493955 COL1A2P08123 1366 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 F5H5T6 163 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 F5H768 121 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 BIRC5O15392 142 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 DEXIO95424 95 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 PSMG1O95456 288 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 CRABP2P29373 138 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 MAGEA2P43356 314 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 TRMT12Q53H54 448 aaKnown RBP3.29□□□□□ -1.88
SMC2-205ENST00000493955 LYZL2Q7Z4W2 148 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 APOBEC3DQ96AK3 386 aaPredicted RBP3.29□□□□□ -1.88
SMC2-205ENST00000493955 OPTNQ96CV9 577 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 BCL2L14Q9BZR8 327 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 ZNF286AQ9HBT8 521 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 LINC00527Q9UJ94 153 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 R4GN34 69 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 U3KQK5 164 aa3.29□□□□□ -1.88
SMC2-205ENST00000493955 MYO3BQ8WXR4 1341 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms