RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MGAT4AQ9UM21 535 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 CNIH1O95406 144 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 APOA2P02652 100 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 PJVKQ0ZLH3 352 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 HAGHQ16775 308 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 MOGAT2Q3SYC2 334 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 ADAMTSL5Q6ZMM2 481 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 CEACAM19Q7Z692 300 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 FAM89BQ8N5H3 189 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 OR6M1Q8NGM8 313 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 OR9G4Q8NGQ1 327 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 C12orf4Q9NQ89 552 aa13.26□□□□□ -0.29
COL9A1-210ENST00000493682 STARD9Q9P2P6 4700 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 IGKV1-6A0A0C4DH72 117 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 H0Y980 276 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 P2RY14Q15391 338 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 HSD17B12Q53GQ0 312 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 URM1Q9BTM9 101 aaKnown RBP13.25□□□□□ -0.29
COL9A1-210ENST00000493682 RDH8Q9NYR8 311 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 HSF4Q9ULV5 492 aa13.25□□□□□ -0.29
COL9A1-210ENST00000493682 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-210ENST00000493682 M0R1X1 148 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 IGLV2-23P01705 113 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 UCHL1P09936 223 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 THAP7Q9BT49 309 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-210ENST00000493682 MND1Q9BWT6 205 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 SLC35D1Q9NTN3 355 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
COL9A1-210ENST00000493682 BRI3O95415 125 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 CDK1P06493 297 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 CRYGBP07316 175 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 TMEM50BP56557 158 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 DEFA5Q01523 94 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 RNLSQ5VYX0 342 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-210ENST00000493682 ARHGAP5-AS1Q96IT6 56 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 TMEM68Q96MH6 324 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 GFI1Q99684 422 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 TINAGL1Q9GZM7 467 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-210ENST00000493682 TUBA4BQ9H853 241 aa13.23□□□□□ -0.29
COL9A1-210ENST00000493682 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
COL9A1-210ENST00000493682 LSM2Q9Y333 95 aaKnown RBP13.23□□□□□ -0.29
COL9A1-210ENST00000493682 DNAH1Q9P2D7 4330 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 TRDCB7Z8K6 153 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 TRBV12-3P01733 135 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 CSN3P07498 182 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 AADACP22760 399 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 LGALS7P47929 136 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 DYRK1AQ13627 763 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 SPHARQ15513 63 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 CMSS1Q9BQ75 279 aaKnown RBP13.22□□□□□ -0.29
COL9A1-210ENST00000493682 PECRQ9BY49 303 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 PLGRKTQ9HBL7 147 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 BIRC6Q9NR09 4857 aa13.22□□□□□ -0.29
COL9A1-210ENST00000493682 SLC17A2O00624 439 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 IFNA6P05013 189 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 PLAC9Q5JTB6 97 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 LCN12Q6JVE5 192 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 BVESQ8NE79 360 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 TMEM203Q969S6 136 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 HARBI1Q96MB7 349 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 COA4Q9NYJ1 87 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 SIGLEC8Q9NYZ4 499 aa13.21□□□□□ -0.29
COL9A1-210ENST00000493682 IZUMO1RA6ND01 250 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 PTGES3LE9PB15 166 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
COL9A1-210ENST00000493682 CD3GP09693 182 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 SERPINB10P48595 397 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 MED22Q15528 200 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 RAB11BQ15907 218 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 TATDN3Q17R31 274 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 Q8N402 240 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 SDHAF2Q9NX18 166 aa13.2□□□□□ -0.3
COL9A1-210ENST00000493682 AK6Q9Y3D8 172 aaKnown RBP13.2□□□□□ -0.3
COL9A1-210ENST00000493682 SRRM4A7MD48 611 aaKnown RBP13.19□□□□□ -0.3
COL9A1-210ENST00000493682 EBAG9O00559 213 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 FABP7O15540 132 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 OR2A4O95047 310 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 APELAP0DMC3 54 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 MECP2P51608 486 aaKnown RBP13.19□□□□□ -0.3
COL9A1-210ENST00000493682 RCN1Q15293 331 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 MRGPRG-AS1Q2M3A8 158 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 LIPKQ5VXJ0 399 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 TMEM91Q6ZNR0 172 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 C5orf30Q96GV9 206 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 RETNQ9HD89 108 aa13.19□□□□□ -0.3
COL9A1-210ENST00000493682 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 BET1O15155 118 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 SHOXO15266 292 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 CLDN12P56749 244 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms