RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SMIM31A0A1B0GVY4 71 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 HSD17B6O14756 317 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 RAB29O14966 203 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 OR2F2O95006 317 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 FAM106CPP0CH98 169 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 ELK1P19419 428 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 BTF3P20290 206 aaKnown RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 IL3RAP26951 378 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 PPP1CCP36873 323 aaKnown RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 CEACAM6P40199 344 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 RAB13P51153 203 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 TAS2R20P59543 309 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 ARFRP1Q13795 201 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 GNMTQ14749 295 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 MSMO1Q15800 293 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 ZNF660Q6AZW8 331 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 Q6ZSV7 163 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 H1FOOQ8IZA3 346 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 SAMD12Q8N8I0 201 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 LINC01006Q8NI28 216 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 GPX8Q8TED1 209 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 WIPF2Q8TF74 440 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 C15orf40Q8WUR7 153 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 GIMAP1Q8WWP7 306 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 RPEQ96AT9 228 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 RBM14Q96PK6 669 aaKnown RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 RNF5Q99942 180 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 ABHD14AQ9BUJ0 271 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 MIXL1Q9H2W2 232 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 SCPEP1Q9HB40 452 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 CHMP1AQ9HD42 196 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 ZNF230Q9UIE0 474 aaPredicted RBP5.36□□□□□ -1.55
VPS52-219ENST00000493379 RNF114Q9Y508 228 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 HILPDAQ9Y5L2 63 aa5.36□□□□□ -1.55
VPS52-219ENST00000493379 IGHV3-43A0A0B4J1X8 118 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 A0A1W2PPE3 182 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 FAM172BPA6NC97 362 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 BTBD17A6NE02 478 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 M0QZK8 103 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 CTDSP2O14595 271 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 TIMM23O14925 209 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 CTDSPLO15194 276 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 FGF16O43320 207 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 SLC22A5O76082 557 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 IGLV2-14P01704 120 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 IGHV3-7P01780 117 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 CT45A6P0DMU7 189 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 CT45A5P0DMU8 189 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 CT45A7P0DMV0 189 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 IGHV3-43DP0DP04 118 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 GCSHP23434 173 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 PAX6P26367 422 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 PRSS3P35030 304 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 SOX6P35712 828 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 TALDO1P37837 337 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 ARHGDIBP52566 201 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 PROK1P58294 105 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 GNG2P59768 71 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 MRPS15P82914 257 aaKnown RBP5.35□□□□□ -1.55
VPS52-219ENST00000493379 EIF4EBP1Q13541 118 aaPredicted RBP5.35□□□□□ -1.55
VPS52-219ENST00000493379 LTC4SQ16873 150 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 IGSF11Q5DX21 431 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 TMEM69Q5SWH9 247 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 C11orf88Q6PI97 169 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR2AK2Q8NG84 335 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR5AP2Q8NGF4 316 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR8H1Q8NGG4 311 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR10X1Q8NGY0 326 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR10J5Q8NHC4 309 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 UBALD1Q8TB05 177 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 NUDCD2Q8WVJ2 157 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 SNAPC3Q92966 411 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 TOMM40LQ969M1 308 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 PHF21AQ96BD5 680 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 DUX5Q96PT3 197 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 ABHD1Q96SE0 405 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 NABP2Q9BQ15 211 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 ST6GALNAC5Q9BVH7 336 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 PARP12Q9H0J9 701 aaKnown RBP5.35□□□□□ -1.55
VPS52-219ENST00000493379 MMP27Q9H306 513 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 RDH8Q9NYR8 311 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 OR1A1Q9P1Q5 309 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 COMMD3Q9UBI1 195 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 RSL24D1Q9UHA3 163 aaKnown RBP5.35□□□□□ -1.55
VPS52-219ENST00000493379 ZNF107Q9UII5 783 aaPredicted RBP5.35□□□□□ -1.55
VPS52-219ENST00000493379 ZNF580Q9UK33 172 aa5.35□□□□□ -1.55
VPS52-219ENST00000493379 DNAH9Q9NYC9 4486 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 SAA2-SAA4A0A096LPE2 208 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 CLPSL1A2RUU4 121 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 CHST1O43916 411 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 HPGDSO60760 199 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 SAA2P0DJI9 122 aaPredicted RBP5.34□□□□□ -1.55
VPS52-219ENST00000493379 PTHLHP12272 177 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 MC5RP33032 325 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 ETV6P41212 452 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 GNG10P50151 68 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms