RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 PPIFP30405 207 aaKnown RBP5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 DUTP33316 252 aaKnown RBP5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 RORCP51449 518 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 BRWD1-AS2P59051 145 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 TAS2R20P59543 309 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 RPL30P62888 115 aaKnown RBP5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 SSBP2P81877 361 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 EIF4EBP1Q13541 118 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 SPCS2Q15005 226 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 PSG5Q15238 335 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 MRGPRG-AS1Q2M3A8 158 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 C19orf54Q5BKX5 351 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 ETV3LQ6ZN32 361 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 PDPNQ86YL7 162 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 FOXRED2Q8IWF2 684 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 RNF152Q8N8N0 203 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 BEST4Q8NFU0 473 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 OR4X2Q8NGF9 303 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 OR51J1Q9H342 316 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 TPSG1Q9NRR2 321 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 ZNF580Q9UK33 172 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 OR2W1Q9Y3N9 320 aa5.63□□□□□ -1.51
PDLIM1-204ENST00000492511 G3V4G9 280 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ARPC1BO15143 372 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ATP6V0E1O15342 81 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 HPGDSO60760 199 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RBBP9O75884 186 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 IGHG4P01861 327 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 APOA1P02647 267 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RPLP1P05386 114 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 NAT1P18440 290 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 AADACP22760 399 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 PSMB8P28062 276 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 THBS3P49746 956 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 LUMP51884 338 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 CRIP2P52943 208 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RPS16P62249 146 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RPL23AP62750 156 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 CX3CL1P78423 397 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 TMEM177Q53S58 311 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 TMEM69Q5SWH9 247 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ZNF660Q6AZW8 331 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 TEX38Q6PEX7 206 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 GPR141Q7Z602 305 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 LYSMD2Q8IV50 215 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 COMMD1Q8N668 190 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ZNF645Q8N7E2 425 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 MINDY2Q8NBR6 621 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 BVESQ8NE79 360 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 OR4F17Q8NGA8 305 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ACOT12Q8WYK0 555 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 FLYWCH2Q96CP2 140 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 CMTM3Q96MX0 182 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 OR4F4Q96R69 305 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 CLCC1Q96S66 551 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 GPHA2Q96T91 129 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 KLK15Q9H2R5 256 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 SLC35D1Q9NTN3 355 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 ZFP57Q9NU63 452 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 KIAA1456Q9P272 454 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 METTL1Q9UBP6 276 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RBMX2Q9Y388 322 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 RBM7Q9Y580 266 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 NUBP2Q9Y5Y2 271 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 WSB1Q9Y6I7 421 aa5.62□□□□□ -1.51
PDLIM1-204ENST00000492511 SLC25A17O43808 307 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 SOX15O60248 233 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 CA2P00918 260 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 APOA2P02652 100 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 ELANEP08246 267 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 OR5H8P0DN80 308 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 ZNF182P17025 639 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 VDAC1P21796 283 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 FCGR2CP31995 323 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 CBX5P45973 191 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 RFX2P48378 723 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 ARPC4P59998 168 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 SLC35B1P78383 322 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 PJVKQ0ZLH3 352 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 FOXE3Q13461 319 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 BEAN1Q3B7T3 259 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 OXLD1Q5BKU9 147 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 SAMD5Q5TGI4 173 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 TET2Q6N021 2002 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 DHRS11Q6UWP2 260 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 ZNF562Q6V9R5 426 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 OVCH2Q7RTZ1 564 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 C1QL4Q86Z23 238 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 OR5AP2Q8NGF4 316 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 MYOZ3Q8TDC0 251 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 GPX8Q8TED1 209 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 GIMAP1Q8WWP7 306 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 TSNAXQ99598 290 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 FAM103A1Q9BTL3 118 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 MIXL1Q9H2W2 232 aa5.61□□□□□ -1.51
PDLIM1-204ENST00000492511 PARP11Q9NR21 331 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms