RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	MGAT4A	Q9UM21	535 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	DNAH7	Q8WXX0	4024 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170		A0A0B4J203	849 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	SMIM30	A4D0T7	59 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	HSPA12A	O43301	675 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	AIRE	O43918	545 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	HLA-DRB3	P79483	266 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR56B1	Q8NGI3	324 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR6Q1	Q8NGQ2	317 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	CASTOR1	Q8WTX7	329 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	ABHD14B	Q96IU4	210 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	RNF5	Q99942	180 aa		11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	PARP12	Q9H0J9	701 aa	Known RBP	11.86	□□□□□ -0.51
MRPL55-231	ENST00000492170	IGHV4OR15-8	A0A075B7B6	117 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170		A0A087WW49	117 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	TRBV6-6	A0A0A6YYG2	114 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	CLEC2L	P0C7M8	214 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	ZBTB25	P24278	435 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	CD40LG	P29965	261 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	VEGFC	P49767	419 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	PITPNA	Q00169	270 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	MXD1	Q05195	221 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	ACTBL2	Q562R1	376 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	UNQ5815/PRO19632	Q6UWF5	114 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	PPP1R27	Q86WC6	154 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR5AN1	Q8NGI8	311 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	ARPC1A	Q92747	370 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	FLYWCH2	Q96CP2	140 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	MRPS26	Q9BYN8	205 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR1A1	Q9P1Q5	309 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	METTL1	Q9UBP6	276 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	AK3	Q9UIJ7	227 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	NUBP2	Q9Y5Y2	271 aa		11.85	□□□□□ -0.51
MRPL55-231	ENST00000492170	RAB27B	O00194	218 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	FCN1	O00602	326 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	TMEM127	O75204	238 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	SPDEF	O95238	335 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR8U9	P0C7N5	309 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	EGR2	P11161	476 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	GP9	P14770	177 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	SPN	P16150	400 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	TGFBR1	P36897	503 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	CEACAM6	P40199	344 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	SCAND1	P57086	179 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	TPPP2	P59282	170 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	MOGAT2	Q3SYC2	334 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	PLAC9	Q5JTB6	97 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	ACSM6	Q6P461	480 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	ARHGAP5-AS1	Q96IT6	56 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	RCHY1	Q96PM5	261 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	CLCC1	Q96S66	551 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	TSNAX	Q99598	290 aa	Known RBP	11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	AGMAT	Q9BSE5	352 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	FAM103A1	Q9BTL3	118 aa	Known RBP	11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	FUNDC2	Q9BWH2	189 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	PECR	Q9BY49	303 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	SLA2	Q9H6Q3	261 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	C12orf4	Q9NQ89	552 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	TPSG1	Q9NRR2	321 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	DAPK2	Q9UIK4	370 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	GAB2	Q9UQC2	676 aa		11.84	□□□□□ -0.51
MRPL55-231	ENST00000492170	ARPC1B	O15143	372 aa	Known RBP	11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	CA2	P00918	260 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	IGHV3-11	P01762	117 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	HSPB1	P04792	205 aa	Known RBP	11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	TFAP2A	P05549	437 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	ALDH3B2	P48448	385 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	AKIRIN2	Q53H80	203 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZNF562	Q6V9R5	426 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	SBSPON	Q8IVN8	264 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	LFNG	Q8NES3	379 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	OR10R2	Q8NGX6	335 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	OR4C12	Q96R67	309 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZNF221	Q9UK13	617 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	KCNK7	Q9Y2U2	307 aa		11.83	□□□□□ -0.52
MRPL55-231	ENST00000492170	MFNG	O00587	321 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	APOA2	P02652	100 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	PSG5	Q15238	335 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	OVCH2	Q7RTZ1	564 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	PDPN	Q86YL7	162 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	MUC7	Q8TAX7	377 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	LGALS14	Q8TCE9	139 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	RAB3C	Q96E17	227 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	MS4A10	Q96PG2	267 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170		Q9N2K0	584 aa		11.82	□□□□□ -0.52
MRPL55-231	ENST00000492170	METTL21EP	A6NDL7	271 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	GABARAP	O95166	117 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	TRGV3	P03979	118 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	IGKV1-16	P04430	117 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	SCT	P09683	121 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	FRMD6-AS1	P0C7T7	363 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	SNRPB	P14678	240 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	HIST1H1D	P16402	221 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	RPS19	P39019	145 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	RPS16	P62249	146 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	LSM3	P62310	102 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	ANKRD13B	Q86YJ7	626 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms