RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NHLH2Q02577 135 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 CNN3Q15417 329 aaKnown RBP7.81□□□□□ -1.16
BRCA1-219ENST00000491747 HEPN1Q6WQI6 88 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 TMEM182Q6ZP80 229 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-219ENST00000491747 HPSE2Q8WWQ2 592 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 RAB1CQ92928 201 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 TOLLIPQ9H0E2 274 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 PUS1Q9Y606 427 aaKnown RBP eCLIP7.81□□□□□ -1.16
BRCA1-219ENST00000491747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.81□□□□□ -1.163e-7■■■■■ 41.1
BRCA1-219ENST00000491747 CUBNO60494 3623 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 BTBD17A6NE02 478 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 ANKRD30BLA7E2S9 258 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 GATCO43716 136 aaKnown RBP7.81□□□□□ -1.16
BRCA1-219ENST00000491747 PTBP3O95758 552 aaKnown RBP7.81□□□□□ -1.16
BRCA1-219ENST00000491747 UCP3P55916 312 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 SRPXP78539 464 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 PHLDA2Q53GA4 152 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF826PQ6ZT77 177 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 C11orf53Q8IXP5 236 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 OR52M1Q8NGK5 317 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 LPAR2Q9HBW0 351 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 PHF1O43189 567 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-219ENST00000491747 ANGPTL7O43827 346 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 CDS2O95674 445 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 GRPP07492 148 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 FBP1P09467 338 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 PPP1CCP36873 323 aaKnown RBP7.8□□□□□ -1.16
BRCA1-219ENST00000491747 EWSR1Q01844 656 aaKnown RBP eCLIP7.8□□□□□ -1.16
BRCA1-219ENST00000491747 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 MOB3AQ96BX8 217 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 TIMD4Q96H15 378 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 POM121Q96HA1 1249 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 GPR173Q9NS66 373 aa7.8□□□□□ -1.16
BRCA1-219ENST00000491747 RCL1Q9Y2P8 373 aaKnown RBP7.8□□□□□ -1.16
BRCA1-219ENST00000491747 FAM230AA0A1W2PPH8 454 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 HSPA12AO43301 675 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 RPS10P46783 165 aaKnown RBP7.79□□□□□ -1.16
BRCA1-219ENST00000491747 RBP2P50120 134 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 HERV-K104P61576 105 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 PRDX4Q13162 271 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 KIAA0141Q14154 515 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-219ENST00000491747 IL17RELQ6ZVW7 336 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 OR2G3Q8NGZ4 309 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 Q8TCH9 128 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 PIGCQ92535 297 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 BORCS8Q96FH0 119 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 GGACTQ9BVM4 153 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 PAPOLGQ9BWT3 736 aaKnown RBP7.79□□□□□ -1.16
BRCA1-219ENST00000491747 DMRT1Q9Y5R6 373 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 A0A1B0GV50 99 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 SPRY1O43609 319 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-219ENST00000491747 CRLF1O75462 422 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 HOXA5P20719 270 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 S100A2P29034 98 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 LHFPL2Q6ZUX7 228 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 FAM185AQ8N0U4 392 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 SLC35G3Q8N808 338 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 OR5P3Q8WZ94 311 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 YPEL4Q96NS1 127 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 SPIN2AQ99865 258 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 SPIN2BQ9BPZ2 258 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 KIAA1456Q9P272 454 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF391Q9UJN7 358 aa7.79□□□□□ -1.16
BRCA1-219ENST00000491747 SONP18583 2426 aaKnown RBP7.79□□□□□ -1.16
BRCA1-219ENST00000491747 A0A087WWC5 75 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 B4DSR2 109 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 GPR37O15354 613 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 PITX3O75364 302 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 NKX2-1P43699 371 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 CDX1P47902 265 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF154Q13106 437 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 RARRES2Q99969 163 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 MPC1Q9Y5U8 109 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 PPIAL4EA0A075B759 164 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 CXorf65A6NEN9 183 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF729A6NN14 1252 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 PPIAL4DF5H284 164 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 H3BQ15 152 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 IFNL4K9M1U5 179 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 GEMIN2O14893 280 aaKnown RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 MSMBP08118 114 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 PPIAL4FP0DN26 164 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 EGR1P18146 543 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 ZFP36P26651 326 aaKnown RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
BRCA1-219ENST00000491747 TMEM155Q4W5P6 130 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 LYPD2Q6UXB3 125 aa7.78□□□□□ -1.16
BRCA1-219ENST00000491747 ASCL4Q6XD76 172 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms