RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FABP7O15540 132 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 TRGV3P03979 118 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
COL6A3-211ENST00000491233 CD3GP09693 182 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 OR8U9P0C7N5 309 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 GP9P14770 177 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 CRHBPP24387 322 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 MRPS15P82914 257 aaKnown RBP10.51□□□□□ -0.73
COL6A3-211ENST00000491233 MOGAT2Q3SYC2 334 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 PRSS48Q7RTY5 328 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.51□□□□□ -0.73
COL6A3-211ENST00000491233 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 OR6Q1Q8NGQ2 317 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 FLYWCH2Q96CP2 140 aaKnown RBP10.51□□□□□ -0.73
COL6A3-211ENST00000491233 OR2D2Q9H210 308 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 SLA2Q9H6Q3 261 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 RYR3Q15413 4870 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
COL6A3-211ENST00000491233 BET1O15155 118 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 FCGR3AP08637 254 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 CD40LGP29965 261 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 SERPINB10P48595 397 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 OR10A3P58181 314 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 SSBP2P81877 361 aaPredicted RBP10.5□□□□□ -0.73
COL6A3-211ENST00000491233 FXYD3Q14802 87 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 IGSF11Q5DX21 431 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 OVCH2Q7RTZ1 564 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 HAPLN4Q86UW8 402 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 POC5Q8NA72 575 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 RAB3CQ96E17 227 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 RHOVQ96L33 236 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 HARBI1Q96MB7 349 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 CABLES2Q9BTV7 478 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 ACOT13Q9NPJ3 140 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 RAB22AQ9UL26 194 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 KCNK7Q9Y2U2 307 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
COL6A3-211ENST00000491233 TENM3Q9P273 2699 aa10.5□□□□□ -0.73
COL6A3-211ENST00000491233 A0A075B6Q4 140 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 SHISA3A0PJX4 238 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 TRIM64CA6NLI5 447 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 MFNGO00587 321 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 RANBP1P43487 201 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 PSMD7P51665 324 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 TBCEQ15813 527 aaPredicted RBP10.49□□□□□ -0.73
COL6A3-211ENST00000491233 SSX1Q16384 188 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 ZNF367Q7RTV3 350 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 ZNF355PQ9NSJ1 428 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 SDHAF2Q9NX18 166 aa10.49□□□□□ -0.73
COL6A3-211ENST00000491233 TRBV6-7A0A0A0MS04 114 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 H3BUA1 57 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 PDCD5O14737 125 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 CNIH1O95406 144 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 GSTT2P0CG29 244 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 GSTT2BP0CG30 244 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 GNB3P16520 340 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 GADD45AP24522 165 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 PJVKQ0ZLH3 352 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 SRSF7Q16629 238 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL6A3-211ENST00000491233 OR5T1Q8NG75 326 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 OR10R2Q8NGX6 335 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 OR10J5Q8NHC4 309 aa10.48□□□□□ -0.73
COL6A3-211ENST00000491233 A0A0B4J203 849 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 C13orf42A0A1B0GVH6 325 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 RAB27BO00194 218 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 CRYGBP07316 175 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 HIST1H1DP16402 221 aaKnown RBP10.47□□□□□ -0.73
COL6A3-211ENST00000491233 MYL9P24844 172 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 DEFA5Q01523 94 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 CBX3Q13185 183 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 IZUMO2Q6UXV1 221 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 BVESQ8NE79 360 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 CNBD2Q96M20 576 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 RSRP1Q9BUV0 290 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 ELOVL1Q9BW60 279 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
COL6A3-211ENST00000491233 NDUFB11Q9NX14 153 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 ZNF230Q9UIE0 474 aaPredicted RBP10.47□□□□□ -0.73
COL6A3-211ENST00000491233 STUB1Q9UNE7 303 aa10.47□□□□□ -0.73
COL6A3-211ENST00000491233 TRAV1-2A0A0B4J238 106 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 ANKRD34BA5PLL1 514 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 IFITM5A6NNB3 132 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 C3orf84H3BNL1 204 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 SHOXO15266 292 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 DIRAS3O95661 229 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 RAB6AP20340 208 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 ZP3P21754 424 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 LGALS7P47929 136 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 ARFRP1Q13795 201 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 RTL8BQ17RB0 113 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 TMEM177Q53S58 311 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 GINS4Q9BRT9 223 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 VCX3BQ9H321 246 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms