RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 IGLL1P15814 213 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 CX3CL1P78423 397 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
COL27A1-206ENST00000490831 PSG5Q15238 335 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 REC114Q7Z4M0 266 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 CROCCP3Q8IVE0 287 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 NUDCD2Q8WVJ2 157 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 TSNAXQ99598 290 aaKnown RBP11.89□□□□□ -0.51
COL27A1-206ENST00000490831 SPATA2Q9UM82 520 aa11.89□□□□□ -0.51
COL27A1-206ENST00000490831 TRAV41A0A0B4J266 112 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 NUDT19A8MXV4 375 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 G3V318 75 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 FCN1O00602 326 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
COL27A1-206ENST00000490831 GNG2P59768 71 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 KIAA0141Q14154 515 aaPredicted RBP11.88□□□□□ -0.51
COL27A1-206ENST00000490831 CNIH2Q6PI25 160 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
COL27A1-206ENST00000490831 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 SLC35D1Q9NTN3 355 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 NECAP2Q9NVZ3 263 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 FBXO7Q9Y3I1 522 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
COL27A1-206ENST00000490831 TGP01266 2768 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 IGLV2-23P01705 113 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 TGFBR1P36897 503 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 RPS19P39019 145 aaKnown RBP11.87□□□□□ -0.51
COL27A1-206ENST00000490831 LGALS7P47929 136 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 RPS16P62249 146 aaKnown RBP11.87□□□□□ -0.51
COL27A1-206ENST00000490831 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 TCTEX1D1Q8N7M0 179 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 DDB2Q92466 427 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 RAX2Q96IS3 184 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 METTL1Q9UBP6 276 aaKnown RBP11.87□□□□□ -0.51
COL27A1-206ENST00000490831 ANXA10Q9UJ72 324 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
COL27A1-206ENST00000490831 TRAV18A0A075B6X5 111 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 CCL24O00175 119 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 CRYGBP07316 175 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 RRASP10301 218 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
COL27A1-206ENST00000490831 RUNX1Q01196 453 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 PLGLAQ15195 96 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 TMEM177Q53S58 311 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 ADTRPQ96IZ2 230 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 AUNIPQ9H7T9 357 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
COL27A1-206ENST00000490831 RBM7Q9Y580 266 aaKnown RBP11.86□□□□□ -0.51
COL27A1-206ENST00000490831 TUSC2O75896 110 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 SLC22A5O76082 557 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 EGFEM1PQ0D2K5 195 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 FHL3Q13643 280 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 AKIRIN2Q53H80 203 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 ZNF491Q8N8L2 437 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 MCRIP2Q9BUT9 160 aaKnown RBP11.85□□□□□ -0.51
COL27A1-206ENST00000490831 GPR61Q9BZJ8 451 aa11.85□□□□□ -0.51
COL27A1-206ENST00000490831 LINC00473A8K010 186 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 I3L521 148 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 XRCC3O43542 346 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 SLC25A17O43808 307 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 SOX15O60248 233 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 CA2P00918 260 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 IGLV2-14P01704 120 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 PRB2P02812 416 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 NFYAP23511 347 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 RAB9AP51151 201 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 LUMP51884 338 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 TMEM267Q0VDI3 215 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 RTL8BQ17RB0 113 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 PPP1R27Q86WC6 154 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 BVESQ8NE79 360 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 BEST4Q8NFU0 473 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 SLC25A46Q96AG3 418 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 TPSG1Q9NRR2 321 aa11.84□□□□□ -0.51
COL27A1-206ENST00000490831 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-206ENST00000490831 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
COL27A1-206ENST00000490831 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
COL27A1-206ENST00000490831 SMIM18P0DKX4 95 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 LSM3P62310 102 aaKnown RBP11.83□□□□□ -0.52
COL27A1-206ENST00000490831 CBX3Q13185 183 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms