RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ACOT13Q9NPJ3 140 aa14.95□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ZNF221Q9UK13 617 aa14.95□□□□□ -0.02
TNFRSF1B-202ENST00000489921 RAB22AQ9UL26 194 aa14.95□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SPDEFO95238 335 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 IGHV3-11P01762 117 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 CRYGBP07316 175 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 RPS16P62249 146 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 PYHIN1Q6K0P9 492 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 OR4A4PQ8NGN8 299 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TSNAXQ99598 290 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 CABLES2Q9BTV7 478 aa14.94□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TRBV6-7A0A0A0MS04 114 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TRAV1-2A0A0B4J238 106 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 RAB27BO00194 218 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 FABP7O15540 132 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SLC25A17O43808 307 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SAP30O75446 220 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 FCGR3AP08637 254 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 GSTT2P0CG29 244 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 GSTT2BP0CG30 244 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SPNP16150 400 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 PJVKQ0ZLH3 352 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TBCEQ15813 527 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 MRGPRG-AS1Q2M3A8 158 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 NR2C2APQ86WQ0 139 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ABHD5Q8WTS1 349 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SDHAF2Q9NX18 166 aa14.93□□□□□ -0.02
TNFRSF1B-202ENST00000489921 M0R1X1 148 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 MFNGO00587 321 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 LY86O95711 162 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 HSPB1P04792 205 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 OR8U9P0C7N5 309 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 PSMD7P51665 324 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 FXYD3Q14802 87 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 OR10R2Q8NGX6 335 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ARPC1AQ92747 370 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 FLYWCH2Q96CP2 140 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 RAB3CQ96E17 227 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SLA2Q9H6Q3 261 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ZNF230Q9UIE0 474 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SMAD5-AS1Q9Y6J3 95 aa14.92□□□□□ -0.02
TNFRSF1B-202ENST00000489921 A0A0B4J203 849 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 IFITM5A6NNB3 132 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SRRM4A7MD48 611 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 BET1O15155 118 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 GNB3P16520 340 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SERPINB10P48595 397 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TPPP2P59282 170 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ZNF367Q7RTV3 350 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SBSPONQ8IVN8 264 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 MAFIPQ8WZ33 124 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 OR2D2Q9H210 308 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 SLC35D1Q9NTN3 355 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 NDUFB11Q9NX14 153 aa14.91□□□□□ -0.02
TNFRSF1B-202ENST00000489921 CSMD3Q7Z407 3707 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 DIRAS3O95661 229 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 APOA2P02652 100 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 IZUMO2Q6UXV1 221 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 GRPEL2Q8TAA5 225 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 CNBD2Q96M20 576 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 ELF5Q9UKW6 265 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 TNCP24821 2201 aa14.9□□□□□ -0.02
TNFRSF1B-202ENST00000489921 IGKV1D-8A0A087WSZ0 117 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 TRDV1A0A1B0GX56 115 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 TRGV3P03979 118 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 GP9P14770 177 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 HIST1H1DP16402 221 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 RAB6AP20340 208 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 LGALS7P47929 136 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 TMEM177Q53S58 311 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 OR5T1Q8NG75 326 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 OR10J5Q8NHC4 309 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 DDB2Q92466 427 aa14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 DYNC2H1Q8NCM8 4307 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-202ENST00000489921 TRIM64CA6NLI5 447 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 PDCD5O14737 125 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 RANBP1P43487 201 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 Q6ZS49 121 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 OVCH2Q7RTZ1 564 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 POC5Q8NA72 575 aa14.88□□□□□ -0.03
TNFRSF1B-202ENST00000489921 A0A075B6Q4 140 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 H3BUA1 57 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 RBMXL2O75526 392 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 BRI3O95415 125 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 RAB3BP20337 219 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 HAPLN4Q86UW8 402 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 H1FOOQ8IZA3 346 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 BVESQ8NE79 360 aa14.87□□□□□ -0.03
TNFRSF1B-202ENST00000489921 LINC00473A8K010 186 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 FRMD6-AS1P0C7T7 363 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 CD40LGP29965 261 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 MRPS15P82914 257 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 C22orf42Q6IC83 251 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 IL34Q6ZMJ4 242 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 Q8N1Y9 231 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 OR6Q1Q8NGQ2 317 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 HARBI1Q96MB7 349 aa14.86□□□□□ -0.03
TNFRSF1B-202ENST00000489921 CNIH1O95406 144 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms